Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0036s0073 Marchantia polymorpha HOM05D009556 ORTHO05D011767 1.0e-126 456.8 243 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1671 Anthoceros agrestis HOM05D009556 ORTHO05D011767 1.1e-59 234.2 231 59.7
Pp3c9_2740 Physcomitrium patens HOM05D004347 ORTHO05D005270 3.1e-59 232.6 201 63.2
Pp3c9_2745 Physcomitrium patens HOM05D004347 ORTHO05D005270 3.1e-59 232.6 201 63.2
Pp3c20_22760 Physcomitrium patens HOM05D009556 ORTHO05D011767 7.7e-58 228.0 171 70.8
Pp3c15_7070 Physcomitrium patens HOM05D004347 ORTHO05D005270 3.8e-57 225.7 204 60.3
SEGI_37799 Sequoiadendron giganteum HOM05D009556 ORTHO05D011767 1.0e-54 217.6 186 61.8
SMO134G0271 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 1.4e-51 207.2 192 59.4
SEGI_33600 Sequoiadendron giganteum HOM05D009556 ORTHO05D011767 9.1e-51 204.5 198 56.1
Aqoxy2G03847 Aquilegia oxysepala HOM05D009556 ORTHO05D011767 2.3e-46 189.9 169 55.6
ATR0088G015 Amborella trichopoda HOM05D009556 ORTHO05D011767 3.3e-45 186.0 184 51.6
MBI07_g19552_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 3.7e-44 182.6 176 52.8
SMO364G0523 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 1.1e-43 181.0 141 61.7
CBR_g22369 Chara braunii HOM05D009556 ORTHO05D011767 8.5e-41 171.4 239 43.5
Nn1g03118 Nelumbo nucifera HOM05D009556 ORTHO05D011767 5.2e-38 162.2 158 51.9
HPP92_002443 Vanilla planifolia HOM05D009556 ORTHO05D011767 1.2e-37 161.0 172 50.0
CDE11G0542 Ceratophyllum demersum HOM05D009556 ORTHO05D011767 3.4e-37 159.5 177 46.3
Os04g0136700 Oryza sativa ssp. japonica HOM05D009556 ORTHO05D011767 1.3e-36 157.5 182 46.7
CDE02G2621 Ceratophyllum demersum HOM05D009556 ORTHO05D011767 2.2e-36 156.8 160 46.9
Os02g0818000 Oryza sativa ssp. japonica HOM05D009556 ORTHO05D011767 4.1e-35 152.5 185 44.9
TAR362G1180 Trochodendron aralioides HOM05D009556 ORTHO05D011767 5.3e-35 152.1 172 47.7
Zm00001eb191350 Zea mays HOM05D009556 ORTHO05D011767 2.2e-33 146.7 207 38.6
Zm00001eb088850 Zea mays HOM05D009556 ORTHO05D011767 2.3e-25 120.2 119 55.5
Nn1g03115 Nelumbo nucifera HOM05D009556 ORTHO05D011767 3.6e-23 112.8 115 46.1
Nn1g03117 Nelumbo nucifera HOM05D009556 ORTHO05D011767 3.0e-22 109.8 111 45.0
MBI10_g09188_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 1.7e-20 104.0 117 42.7
SMO285G0006 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 1.8e-19 100.5 82 63.4
Pp3c24_1471 Physcomitrium patens HOM05D009556 ORTHO05D011767 1.7e-17 94.0 148 39.2
MBI10_g09184_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 1.2e-15 87.8 61 77.0
CBR_g23156 Chara braunii HOM05D009556 ORTHO05D011767 8.0e-15 85.1 117 36.8
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.0e-13 80.5 112 40.2
MCO05G035 Micromonas commoda HOM05D009556 ORTHO05D011767 1.1e-11 74.7 121 40.5


User provided reference genes

Program Settings