Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 9.6e-135 483.4 230 100.0
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 2.7e-68 262.7 172 72.1
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.5e-66 256.1 187 66.3
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.7e-65 251.9 175 65.7
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.7e-65 251.9 167 70.1
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 4.7e-65 251.9 163 72.4
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 6.1e-65 251.5 181 65.2
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 8.0e-65 251.1 202 62.4
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 1.0e-64 250.8 163 71.8
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.4e-64 250.4 172 66.9
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.8e-64 250.0 163 71.2
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.3e-64 249.6 177 66.7
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.3e-64 249.6 168 70.2
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 4.0e-64 248.8 178 66.9
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 5.2e-64 248.4 171 67.8
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 5.2e-64 248.4 163 70.6
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.9e-64 247.7 163 70.6
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 8.9e-64 247.7 174 66.1
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.2e-63 247.3 162 71.6
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.2e-63 247.3 182 65.4
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.2e-63 247.3 184 64.7
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.2e-63 247.3 171 68.4
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-63 246.9 177 66.1
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.5e-63 246.9 184 64.1
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.6e-63 246.1 174 64.9
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 3.4e-63 245.7 163 68.1
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 3.4e-63 245.7 167 68.3
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 4.4e-63 245.4 181 64.6
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 4.4e-63 245.4 163 69.3
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 4.4e-63 245.4 163 69.3
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.7e-63 245.0 163 68.7
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 5.7e-63 245.0 182 64.8
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 5.7e-63 245.0 174 64.9
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 7.5e-63 244.6 163 68.7
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 9.8e-63 244.2 176 64.8
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.3e-62 243.8 167 67.7
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.7e-62 243.4 163 69.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.7e-62 243.4 163 69.3
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.2e-62 243.0 167 67.7
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 2.2e-62 243.0 163 68.7
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.2e-62 243.0 171 66.7
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.8e-62 242.7 174 65.5
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.7e-62 242.3 167 65.9
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 3.7e-62 242.3 167 67.1
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 3.7e-62 242.3 163 68.1
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 3.7e-62 242.3 164 68.9
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 3.7e-62 242.3 171 66.1
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 4.9e-62 241.9 163 68.7
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 6.3e-62 241.5 174 63.8
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 8.3e-62 241.1 163 66.9
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 8.3e-62 241.1 172 65.1
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 8.3e-62 241.1 163 66.9
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.1e-61 240.7 167 66.5
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.1e-61 240.7 167 66.5
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.1e-61 240.7 167 66.5
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.1e-61 240.7 167 66.5
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 1.1e-61 240.7 167 66.5
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.1e-61 240.7 181 63.0
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.8e-61 240.0 170 65.9
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.1e-61 239.2 179 63.1
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 4.1e-61 238.8 163 66.3
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 4.1e-61 238.8 178 64.6
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 4.1e-61 238.8 168 65.5
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 4.1e-61 238.8 179 63.7
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 5.4e-61 238.4 144 77.8
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 7.0e-61 238.0 163 66.3
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 7.0e-61 238.0 167 67.1
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 7.0e-61 238.0 171 64.3
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.6e-60 236.9 163 67.5
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.7e-60 236.1 163 65.6
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 2.7e-60 236.1 182 61.5
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 4.5e-60 235.3 170 64.1
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 4.5e-60 235.3 179 63.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 4.5e-60 235.3 172 64.0
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 4.5e-60 235.3 179 61.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 5.9e-60 235.0 144 73.6
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.9e-60 235.0 174 63.2
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.0e-59 234.2 162 67.9
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.3e-59 233.8 202 58.4
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.7e-59 233.4 163 66.9
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 3.9e-59 232.3 193 59.1
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 6.6e-59 231.5 163 65.0
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.5e-58 229.6 182 61.5
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 4.3e-58 228.8 168 66.1
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 6.1e-57 224.9 140 72.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 6.1e-57 224.9 144 70.1
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.4e-56 223.8 140 72.1
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.1e-56 222.6 155 67.1
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 3.1e-56 222.6 140 72.1
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.9e-50 203.4 150 64.7
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.6e-49 200.3 134 70.9
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 4.7e-49 198.7 111 80.2
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 4.7e-49 198.7 151 64.2
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 8.0e-49 198.0 165 58.8
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.5e-47 193.7 132 68.2
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.5e-47 193.7 166 59.0
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 3.7e-46 189.1 142 64.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 8.6e-43 177.9 149 59.7
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 3.3e-42 176.0 169 51.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 6.8e-32 141.7 144 50.7
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 3.0e-27 126.3 140 46.4
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 9.6e-10 68.2 132 36.4
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.8e-08 63.9 36 77.8
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.4e-08 63.5 171 24.6
SMO356G0529 Selaginella moellendorffii HOM05D017363 ORTHO05D018319 2.0e-07 60.5 128 30.5
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 7.6e-07 58.5 151 31.1


User provided reference genes

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