Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 9.8e-155 550.1 270 100.0
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 1.1e-49 201.1 129 70.5
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 2.5e-49 199.9 116 73.3
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 1.6e-48 197.2 116 73.3
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 3.0e-47 193.0 157 56.7
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 6.8e-47 191.8 157 59.2
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 8.8e-47 191.4 113 73.5
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.2e-46 191.0 145 60.0
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 1.2e-46 191.0 118 68.6
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 1.5e-46 190.7 156 55.8
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 2.0e-46 190.3 161 54.7
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 2.0e-46 190.3 137 62.0
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 2.6e-46 189.9 161 54.7
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 2.6e-46 189.9 118 67.8
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 3.4e-46 189.5 161 55.9
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 3.4e-46 189.5 161 55.9
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 3.4e-46 189.5 138 65.9
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 4.4e-46 189.1 153 57.5
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 4.4e-46 189.1 113 71.7
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 9.8e-46 188.0 124 66.1
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 1.3e-45 187.6 126 64.3
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 1.3e-45 187.6 113 69.9
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 1.3e-45 187.6 124 64.5
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 1.7e-45 187.2 154 59.7
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 2.2e-45 186.8 126 65.9
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 2.2e-45 186.8 121 66.9
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 2.2e-45 186.8 161 52.8
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 2.8e-45 186.4 162 53.1
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 2.8e-45 186.4 130 63.1
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 2.8e-45 186.4 130 63.8
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 3.7e-45 186.0 161 55.9
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 4.9e-45 185.7 163 55.2
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 4.9e-45 185.7 145 60.0
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 6.3e-45 185.3 113 68.1
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 8.3e-45 184.9 133 60.2
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 8.3e-45 184.9 134 60.4
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 8.3e-45 184.9 113 69.0
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 8.3e-45 184.9 151 57.0
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 8.3e-45 184.9 113 69.0
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 8.3e-45 184.9 156 59.0
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 8.3e-45 184.9 163 54.0
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 8.3e-45 184.9 157 53.5
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 8.3e-45 184.9 156 56.4
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 1.1e-44 184.5 148 56.1
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.1e-44 184.5 113 68.1
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 1.4e-44 184.1 130 63.1
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.8e-44 183.7 126 62.7
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 2.4e-44 183.3 163 54.6
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 2.4e-44 183.3 145 58.6
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 2.4e-44 183.3 138 60.9
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 2.4e-44 183.3 141 61.0
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 2.4e-44 183.3 141 61.0
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 3.1e-44 183.0 157 58.0
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 3.1e-44 183.0 176 51.1
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 3.1e-44 183.0 152 59.9
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 4.1e-44 182.6 137 60.6
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 4.1e-44 182.6 154 56.5
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 4.1e-44 182.6 152 57.2
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 5.4e-44 182.2 155 55.5
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 7.0e-44 181.8 126 65.9
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 7.0e-44 181.8 136 58.8
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 9.1e-44 181.4 155 54.2
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 9.1e-44 181.4 126 61.9
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 9.1e-44 181.4 162 58.0
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 1.2e-43 181.0 126 61.1
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 2.7e-43 179.9 161 55.3
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 2.7e-43 179.9 136 58.1
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 4.5e-43 179.1 139 59.0
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 4.5e-43 179.1 140 61.4
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 7.7e-43 178.3 118 62.7
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 7.7e-43 178.3 113 65.5
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 7.7e-43 178.3 163 51.5
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 7.7e-43 178.3 165 51.5
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.0e-42 177.9 149 58.4
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 1.0e-42 177.9 161 52.8
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.0e-42 177.9 146 56.8
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 1.0e-42 177.9 113 65.5
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 1.7e-42 177.2 166 54.8
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 2.3e-42 176.8 123 60.2
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.3e-42 176.8 162 52.5
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.3e-42 176.8 162 52.5
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 2.3e-42 176.8 113 65.5
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 2.9e-42 176.4 165 51.5
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 3.8e-42 176.0 171 51.5
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 3.8e-42 176.0 165 52.7
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 3.8e-42 176.0 165 50.9
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 8.6e-42 174.9 147 56.5
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 5.6e-41 172.2 127 58.3
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 7.2e-41 171.8 159 54.7
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 1.6e-40 170.6 141 53.9
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 2.1e-40 170.2 162 49.4
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 1.0e-39 167.9 109 67.9
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 1.4e-39 167.5 145 54.5
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 1.7e-37 160.6 175 48.0
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 2.4e-36 156.8 226 39.8
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 9.2e-36 154.8 198 41.9
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 2.3e-34 150.2 91 69.2
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 8.6e-34 148.3 126 54.0
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 7.3e-33 145.2 171 45.6
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 9.5e-33 144.8 127 54.3
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 1.2e-32 144.4 111 59.5
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 6.2e-32 142.1 92 66.3
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 3.1e-31 139.8 134 52.2
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.4e-30 136.3 155 48.4
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 2.2e-29 133.7 152 46.1
CBR_g38847 Chara braunii HOM05D005520 ORTHO05D006633 8.3e-29 131.7 184 37.5
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 1.4e-28 131.0 120 51.7
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 4.1e-28 129.4 103 51.5
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 7.0e-28 128.6 164 45.7
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 1.6e-27 127.5 96 56.2
PRCOL_00001319 Prasinoderma coloniale HOM05D000442 ORTHO05D001718 2.0e-27 127.1 107 51.4
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 1.3e-26 124.4 130 43.1
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 3.9e-26 122.9 77 64.9
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 3.9e-26 122.9 157 40.1
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 4.4e-22 109.4 122 50.0
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 6.4e-21 105.5 93 59.1
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 8.3e-21 105.1 67 67.2
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 1.1e-20 104.8 81 60.5
Cre14.g633000 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 2.4e-20 103.6 106 41.5
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 3.2e-20 103.2 126 45.2
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 3.2e-20 103.2 100 55.0
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 3.2e-20 103.2 63 66.7
Cfa024926 Carpinus fangiana HOM05D000137 ORTHO05D122446 2.7e-19 100.1 116 38.8
MCO01G319 Micromonas commoda HOM05D005520 ORTHO05D006633 5.6e-17 92.4 101 41.6
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 1.2e-16 91.3 91 47.3
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 2.1e-16 90.5 164 33.5
Ciclev10029975m.g Citrus clementina HOM05D005520 ORTHO05D006633 3.6e-16 89.7 56 64.3
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 3.1e-15 86.7 55 65.5
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 3.4e-14 83.2 225 28.9
SHI05087 Sapria himalayana HOM05D005520 ORTHO05D006633 5.4e-12 75.9 79 39.2
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 1.6e-08 64.3 38 71.1
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 4.7e-08 62.8 82 42.7
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 6.2e-08 62.4 47 57.4
AL1G58430 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.8e-07 60.8 110 36.4
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 2.4e-07 60.5 39 59.0
A06p03510 Brassica napus HOM05D005520 ORTHO05D006633 5.2e-07 59.3 33 69.7
BraA06t23559Z Brassica rapa HOM05D005520 ORTHO05D006633 5.2e-07 59.3 33 69.7
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 7.6e-06 55.5 74 43.2


User provided reference genes

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