Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 8.1e-95 350.5 193 100.0
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 2.9e-28 129.4 130 60.8
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.6e-28 127.9 130 62.3
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.2e-26 124.0 122 57.4
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.3e-23 114.0 95 72.6
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 1.7e-23 113.6 95 72.6
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 2.2e-23 113.2 95 72.6
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 2.2e-23 113.2 95 72.6
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 4.9e-23 112.1 95 71.6
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 6.4e-23 111.7 80 80.0
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 1.4e-22 110.5 138 49.3
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.9e-22 110.2 95 70.5
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.9e-22 110.2 95 70.5
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 1.9e-22 110.2 95 70.5
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 3.2e-22 109.4 97 68.0
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 4.1e-22 109.0 96 68.8
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 4.1e-22 109.0 95 69.5
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 5.4e-22 108.6 95 64.2
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 5.4e-22 108.6 95 64.2
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 5.4e-22 108.6 96 66.7
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 5.4e-22 108.6 95 67.4
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 5.4e-22 108.6 86 61.6
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 7.0e-22 108.2 96 63.5
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 7.0e-22 108.2 93 72.0
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 7.0e-22 108.2 96 68.8
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 7.0e-22 108.2 113 61.1
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 9.2e-22 107.8 139 54.7
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.2e-21 107.5 95 68.4
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 2.0e-21 106.7 96 67.7
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 2.0e-21 106.7 95 68.4
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.0e-21 106.7 84 66.7
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 2.0e-21 106.7 95 69.5
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 2.7e-21 106.3 107 63.6
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 2.7e-21 106.3 144 52.1
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 6.0e-21 105.1 84 67.9
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 6.0e-21 105.1 85 60.0
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 6.0e-21 105.1 161 49.7
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 7.8e-21 104.8 105 54.3
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 7.8e-21 104.8 115 60.9
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.0e-20 104.4 93 69.9
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 1.0e-20 104.4 84 73.8
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 1.3e-20 104.0 82 68.3
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 1.3e-20 104.0 96 66.7
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 1.3e-20 104.0 96 66.7
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 1.7e-20 103.6 84 65.5
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 1.7e-20 103.6 115 60.0
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.7e-20 103.6 87 70.1
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 3.0e-20 102.8 84 71.4
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 3.0e-20 102.8 105 61.9
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 3.0e-20 102.8 105 61.9
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 3.0e-20 102.8 91 64.8
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 3.9e-20 102.4 105 61.9
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 5.0e-20 102.1 149 50.3
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 5.0e-20 102.1 96 65.6
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 5.0e-20 102.1 97 62.9
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 5.0e-20 102.1 95 54.7
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 6.6e-20 101.7 91 63.7
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 6.6e-20 101.7 80 68.8
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 8.6e-20 101.3 96 65.6
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 1.1e-19 100.9 115 60.0
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 1.1e-19 100.9 85 60.0
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 1.5e-19 100.5 130 53.1
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 1.5e-19 100.5 75 64.0
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 3.3e-19 99.4 80 71.2
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 9.5e-19 97.8 128 50.8
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 9.5e-19 97.8 128 50.8
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 9.5e-19 97.8 128 50.8
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 9.5e-19 97.8 128 50.8
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 9.5e-19 97.8 128 50.8
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 1.2e-18 97.4 80 68.8
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.2e-18 97.4 80 68.8
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.8e-18 96.3 125 50.4
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 2.8e-18 96.3 96 62.5
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 3.6e-18 95.9 128 50.0
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 3.6e-18 95.9 62 69.4
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.6e-18 95.9 97 53.6
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 3.6e-18 95.9 97 53.6
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 3.6e-18 95.9 80 67.5
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 4.7e-18 95.5 80 66.2
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 6.2e-18 95.1 97 52.6
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 6.2e-18 95.1 119 52.1
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 8.1e-18 94.7 140 42.1
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 1.1e-17 94.4 80 65.0
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.4e-17 94.0 80 63.8
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 4.4e-16 89.0 80 65.0
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 6.4e-15 85.1 80 65.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 6.4e-15 85.1 80 65.0
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 2.3e-12 76.6 167 32.3
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 1.1e-11 74.3 41 73.2
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.9e-11 73.6 88 58.0
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.6e-10 70.5 99 47.5
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.3e-07 60.8 53 58.5
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 4.1e-06 55.8 30 73.3


User provided reference genes

Program Settings