Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 8.2e-200 700.3 380 100.0
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.2e-09 68.6 79 48.1
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 7.9e-09 65.9 117 36.8
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 7.9e-09 65.9 94 36.2
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 7.9e-09 65.9 79 41.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.3e-08 65.1 153 33.3
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.9e-08 63.5 81 43.2
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 5.1e-08 63.2 110 33.6
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 8.7e-08 62.4 100 33.0
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 2.5e-07 60.8 110 31.8
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.5e-07 60.8 84 39.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.5e-07 60.8 84 38.1
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.3e-07 60.5 88 38.6
AagrBONN_evm.TU.Sc2ySwM_368.3264 Anthoceros agrestis HOM05D029403 ORTHO05D006930 5.7e-07 59.7 82 41.5
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 5.7e-07 59.7 88 39.8
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 5.7e-07 59.7 96 38.5
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.4e-07 59.3 108 32.4
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 7.4e-07 59.3 72 44.4
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 9.6e-07 58.9 133 30.1
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 9.6e-07 58.9 112 33.9
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 9.6e-07 58.9 87 41.4
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 9.6e-07 58.9 111 34.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 9.6e-07 58.9 98 34.7
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-06 58.5 91 38.5
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.3e-06 58.5 100 37.0
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.3e-06 58.5 114 34.2
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.6e-06 58.2 86 34.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.6e-06 58.2 143 30.8
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.6e-06 58.2 100 34.0
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.6e-06 58.2 115 31.3
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 2.1e-06 57.8 88 38.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 2.8e-06 57.4 88 37.5
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.8e-06 57.4 97 39.2
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 3.7e-06 57.0 86 38.4
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.8e-06 56.6 100 33.0
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 4.8e-06 56.6 103 34.0
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.8e-06 56.6 80 41.2
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 6.2e-06 56.2 94 35.1
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 8.2e-06 55.8 90 40.0
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 8.2e-06 55.8 90 40.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 8.2e-06 55.8 80 42.5


User provided reference genes

Program Settings