Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 0.0e+00 1785.0 919 100.0
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.0e-131 473.4 905 35.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 2.3e-99 367.9 917 32.6
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.3e-97 362.1 905 31.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.2e-97 361.3 905 30.8
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.9e-97 360.9 919 30.9
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 6.4e-97 359.8 908 30.7
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.1e-96 359.0 915 30.9
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 1.4e-96 358.6 902 30.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.7e-95 354.4 906 30.6
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 7.8e-95 352.8 908 30.5
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 3.9e-94 350.5 915 30.8
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.1e-94 350.1 908 29.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.1e-94 350.1 923 29.7
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.5e-93 348.6 907 29.2
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.9e-93 348.2 913 30.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 4.3e-93 347.1 909 29.3
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 7.3e-93 346.3 909 29.2
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.6e-92 344.0 928 29.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 4.7e-92 343.6 914 29.6
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.1e-91 342.4 918 30.8
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.1e-91 342.4 909 29.2
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.4e-91 342.0 921 29.5
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.8e-91 341.7 928 29.0
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.8e-91 341.7 914 29.0
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 5.2e-91 340.1 909 29.4
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 5.2e-91 340.1 908 28.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 6.8e-91 339.7 914 29.6
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.8e-91 339.7 909 28.9
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 8.9e-91 339.3 928 29.4
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.2e-90 339.0 909 30.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.0e-90 338.2 913 28.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 4.4e-90 337.0 909 29.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.8e-90 336.7 922 29.7
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 5.8e-90 336.7 912 28.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 7.6e-90 336.3 924 28.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.9e-90 335.9 912 29.7
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.3e-89 335.5 928 29.2
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 2.9e-89 334.3 907 29.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 2.9e-89 334.3 911 28.9
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 3.8e-89 334.0 914 29.8
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.4e-88 332.0 917 29.4
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.4e-88 331.3 914 29.1
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 4.2e-88 330.5 913 28.6
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 5.4e-88 330.1 919 30.0
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.6e-87 328.6 908 29.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.1e-87 328.2 928 29.2
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 3.5e-87 327.4 923 28.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 4.6e-87 327.0 913 28.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 7.8e-87 326.2 916 28.7
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.0e-86 325.9 911 29.2
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.3e-86 325.5 910 28.6
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.3e-86 325.5 909 29.8
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.7e-86 325.1 882 28.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.3e-86 324.7 907 29.0
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 3.9e-86 323.9 911 29.9
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 6.6e-86 323.2 908 28.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 8.7e-86 322.8 918 29.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.1e-85 322.4 927 29.7
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.9e-85 321.6 910 29.0
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 5.6e-85 320.1 918 28.4
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 7.3e-85 319.7 921 28.7
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 9.6e-85 319.3 906 28.3
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 1.2e-84 318.9 908 28.4
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 2.1e-84 318.2 907 29.8
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 2.1e-84 318.2 918 29.0
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 2.8e-84 317.8 929 28.6
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 3.6e-84 317.4 923 28.5
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 4.7e-84 317.0 910 28.9
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 6.2e-84 316.6 918 28.1
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 4.0e-83 313.9 918 27.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 9.0e-83 312.8 864 28.9
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 2.9e-81 307.8 888 30.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.1e-77 295.8 648 33.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 4.3e-77 293.9 672 32.1
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 5.6e-77 293.5 652 32.2
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 5.6e-77 293.5 652 32.2
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 7.3e-77 293.1 937 28.8
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.3e-76 292.4 919 28.3
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 1.4e-75 288.9 529 34.6
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 3.1e-75 287.7 529 34.6
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.9e-74 282.7 903 28.2
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 2.2e-73 281.6 524 34.2
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.8e-73 280.8 857 28.5
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.4e-73 279.6 853 28.5
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 5.4e-72 276.9 518 34.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 1.2e-71 275.8 919 25.9
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 7.9e-71 273.1 913 27.7
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 6.7e-70 270.0 522 34.5
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 8.7e-70 269.6 518 32.4
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 3.3e-69 267.7 743 28.8
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 4.3e-69 267.3 551 33.9
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 8.1e-68 263.1 921 27.1
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 4.6e-63 247.3 422 36.7
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.2e-57 228.4 757 27.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 2.5e-56 224.9 910 25.1
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.7e-53 213.0 691 27.8
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.1e-51 209.5 336 35.7
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.0e-50 205.3 285 40.7
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.6e-47 194.5 695 25.9
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.4e-46 192.6 603 28.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 3.9e-46 191.0 516 28.7
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.5e-45 189.1 289 36.7
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 7.4e-45 186.8 697 25.4
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.9e-42 177.2 329 34.3
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.9e-41 174.9 405 30.1
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.5e-34 152.5 641 24.6
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 4.5e-34 151.0 660 25.3
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.0e-33 147.5 317 31.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.1e-31 142.1 225 39.6
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.6e-31 141.4 643 24.4
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 2.3e-30 138.7 623 26.3
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.0e-29 135.6 428 28.3
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.1e-27 128.3 561 24.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.5e-26 124.8 221 37.1
Mapoly0074s0053 Marchantia polymorpha HOM05D006581 ORTHO05D007870 3.6e-23 114.8 68 82.4
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 2.2e-20 105.5 289 29.8


User provided reference genes

Program Settings