Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.8e-156 555.8 279 100.0
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 5.9e-30 135.6 227 37.0
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.9e-23 114.0 223 34.5
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.5e-20 103.6 115 43.5
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 4.4e-17 92.8 112 40.2
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 9.9e-17 91.7 217 28.1
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.3e-16 91.3 128 32.0
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.7e-16 89.7 115 40.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.4e-15 87.8 172 33.7
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 4.1e-15 86.3 208 26.4
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 5.4e-15 85.9 204 30.4
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.1e-14 84.0 124 41.1
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.1e-14 84.0 119 35.3
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.7e-14 83.6 121 33.9
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.7e-14 83.6 124 40.3
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.7e-14 83.6 118 36.4
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.0e-13 81.6 121 38.8
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.0e-13 81.6 121 39.7
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.3e-13 81.3 158 31.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 6.6e-13 79.0 112 33.9
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 8.6e-13 78.6 112 35.7
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.9e-12 77.4 124 37.9
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 2.1e-11 73.9 126 34.9
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 2.1e-11 73.9 112 36.6
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 2.8e-11 73.6 176 25.6
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.6e-11 73.2 114 31.6
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.7e-11 72.8 131 31.3
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 4.7e-11 72.8 125 30.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 8.1e-11 72.0 118 33.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 8.1e-11 72.0 209 28.7
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.1e-10 71.6 118 31.4
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 2.4e-10 70.5 110 35.5
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 3.1e-10 70.1 114 31.6
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.1e-10 70.1 114 31.6
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 5.2e-10 69.3 165 30.9
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 6.8e-10 68.9 232 24.6
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.5e-09 67.8 110 32.7
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.5e-09 67.8 110 32.7
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.0e-09 67.4 113 29.2
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.4e-09 66.6 188 30.9
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.8e-09 65.9 134 26.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.3e-08 64.7 115 31.3
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.9e-08 63.5 118 31.4
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.9e-08 63.5 118 31.4
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 2.9e-08 63.5 190 30.0
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.9e-08 63.5 149 27.5
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 4.9e-08 62.8 120 31.7
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 4.9e-08 62.8 120 31.7
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 4.9e-08 62.8 128 33.6
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 6.4e-08 62.4 116 33.6
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 8.4e-08 62.0 125 25.6
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 8.4e-08 62.0 125 31.2
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 3.5e-06 56.6 176 28.4


User provided reference genes

Program Settings