Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 1.2e-116 423.3 237 100.0
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 2.2e-25 120.2 214 36.9
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 6.4e-25 118.6 171 43.9
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 9.2e-24 114.8 154 44.2
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 9.2e-24 114.8 219 36.1
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 2.1e-23 113.6 154 42.9
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 2.1e-23 113.6 197 38.1
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.5e-23 112.8 179 40.2
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 4.6e-23 112.5 220 35.0
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 7.8e-23 111.7 205 35.6
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.0e-22 111.3 186 40.3
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.0e-22 111.3 223 35.4
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 1.3e-22 110.9 203 35.0
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 2.3e-22 110.2 156 40.4
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.3e-22 110.2 149 43.6
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 3.0e-22 109.8 156 39.7
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.0e-22 109.8 189 37.0
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 3.9e-22 109.4 210 34.8
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 5.1e-22 109.0 203 36.5
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 6.6e-22 108.6 207 33.8
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 1.5e-21 107.5 159 39.0
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 1.9e-21 107.1 188 36.2
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.5e-21 106.7 189 37.0
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 3.3e-21 106.3 157 37.6
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 4.3e-21 105.9 154 40.9
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 4.3e-21 105.9 208 36.1
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 7.3e-21 105.1 191 35.1
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 7.3e-21 105.1 156 39.7
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 9.6e-21 104.8 202 35.6
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.6e-20 104.0 215 34.0
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.6e-20 104.0 211 37.9
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.1e-20 103.6 192 36.5
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 3.6e-20 102.8 165 37.6
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 3.6e-20 102.8 151 39.1
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 3.6e-20 102.8 154 40.9
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 4.7e-20 102.4 208 34.1
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 6.2e-20 102.1 191 34.0
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 6.2e-20 102.1 221 33.0
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 8.1e-20 101.7 186 35.5
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.1e-19 101.3 151 39.1
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 1.4e-19 100.9 165 36.4
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 1.4e-19 100.9 154 39.0
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.4e-19 100.9 154 37.0
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 2.4e-19 100.1 152 38.2
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 3.1e-19 99.8 203 33.0
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.1e-19 99.8 190 35.8
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.0e-19 99.4 155 39.4
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 5.2e-19 99.0 192 34.4
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 6.8e-19 98.6 159 37.1
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 6.8e-19 98.6 172 37.2
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 8.9e-19 98.2 190 35.3
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 1.2e-18 97.8 192 34.4
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.5e-18 97.4 209 34.4
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 2.0e-18 97.1 180 38.3
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 2.0e-18 97.1 180 38.3
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 2.0e-18 97.1 148 38.5
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 2.0e-18 97.1 194 33.5
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 2.0e-18 97.1 223 33.2
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 2.6e-18 96.7 200 34.0
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 3.4e-18 96.3 198 36.4
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 3.4e-18 96.3 198 36.4
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 4.4e-18 95.9 146 39.0
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 5.8e-18 95.5 146 38.4
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 7.6e-18 95.1 164 35.4
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 9.9e-18 94.7 182 37.4
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 9.9e-18 94.7 154 35.1
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 9.9e-18 94.7 159 37.1
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 1.3e-17 94.4 207 34.3
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 1.3e-17 94.4 206 34.5
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.3e-17 94.4 211 33.6
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.3e-17 94.4 151 37.7
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 1.3e-17 94.4 199 32.2
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 1.3e-17 94.4 160 39.4
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 1.7e-17 94.0 193 35.2
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.7e-17 94.0 154 37.7
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.7e-17 94.0 146 40.4
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 2.2e-17 93.6 157 40.8
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 2.9e-17 93.2 165 35.2
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.8e-17 92.8 157 38.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.8e-17 92.8 154 37.7
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.9e-17 92.4 171 33.9
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 4.9e-17 92.4 163 35.0
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 4.9e-17 92.4 165 37.0
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 8.4e-17 91.7 182 33.0
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.1e-16 91.3 175 34.3
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 1.4e-16 90.9 189 36.0
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.9e-16 90.5 198 31.8
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.9e-16 90.5 202 32.7
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 2.4e-16 90.1 276 30.4
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 2.4e-16 90.1 167 35.9
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 2.4e-16 90.1 201 33.8
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 2.4e-16 90.1 198 31.3
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.2e-16 89.7 156 34.6
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 4.2e-16 89.4 184 33.7
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 5.4e-16 89.0 164 32.9
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 5.4e-16 89.0 154 37.7
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 7.1e-16 88.6 194 32.5
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.6e-15 87.4 183 36.6
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-15 87.0 207 32.4
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 2.7e-15 86.7 151 35.8
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 3.5e-15 86.3 139 38.1
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 3.5e-15 86.3 114 47.4
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.0e-14 84.7 208 30.8
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.3e-14 84.3 151 36.4
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 1.3e-14 84.3 156 34.6
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.7e-14 84.0 239 28.0
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 2.3e-14 83.6 129 40.3
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 6.6e-14 82.0 203 30.0
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 6.6e-14 82.0 207 33.3
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 6.6e-14 82.0 134 38.1
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 8.7e-14 81.6 130 40.0
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 1.1e-13 81.3 122 38.5
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 1.5e-13 80.9 103 47.6
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 3.3e-13 79.7 186 33.9
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 4.3e-13 79.3 202 30.2
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 7.3e-13 78.6 163 36.8
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 9.6e-13 78.2 196 31.6
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.6e-12 77.4 164 33.5
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.8e-12 76.6 190 33.2
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 8.1e-12 75.1 217 30.9
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 1.4e-11 74.3 164 35.4
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-11 74.3 164 35.4
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 1.4e-11 74.3 164 35.4
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.2e-10 71.2 165 31.5
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.0e-10 70.5 213 29.1
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 5.8e-10 68.9 118 36.4
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 3.8e-09 66.2 105 39.0
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 4.9e-09 65.9 180 33.3
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 6.4e-09 65.5 164 31.7
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 6.4e-09 65.5 166 30.1
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 6.4e-09 65.5 105 40.0
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 1.9e-08 63.9 123 35.8
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 3.2e-08 63.2 108 40.7
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 4.2e-08 62.8 85 43.5
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 4.2e-08 62.8 110 39.1
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.1e-07 60.5 118 35.6


User provided reference genes

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