Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 0.0e+00 3577.7 2403 100.0
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.7e-93 349.7 683 34.1
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 1.1e-34 154.5 561 25.7
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 1.3e-32 147.5 497 26.0
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 3.8e-32 146.0 611 25.2
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 6.5e-32 145.2 494 26.1
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 8.4e-32 144.8 493 26.8
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 2.5e-31 143.3 609 24.5
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.2e-30 141.0 616 25.3
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.6e-30 140.6 617 25.4
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 2.1e-30 140.2 616 25.3
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 2.1e-30 140.2 629 24.5
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 3.5e-30 139.4 611 24.4
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 6.1e-30 138.7 493 25.6
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 1.3e-29 137.5 514 24.9
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 2.3e-29 136.7 631 23.8
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 3.9e-29 136.0 514 26.1
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 5.1e-29 135.6 489 24.9
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 6.7e-29 135.2 487 24.8
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 6.7e-29 135.2 491 24.4
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 8.7e-29 134.8 612 24.3
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 8.7e-29 134.8 511 24.9
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 1.5e-28 134.0 487 23.2
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 1.9e-28 133.7 634 25.2
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 3.3e-28 132.9 487 24.2
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 3.3e-28 132.9 612 23.9
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 5.7e-28 132.1 606 24.8
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 5.7e-28 132.1 490 24.7
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 5.7e-28 132.1 511 24.3
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 9.7e-28 131.3 626 24.8
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 1.3e-27 131.0 496 25.6
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 1.3e-27 131.0 616 24.2
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 2.2e-27 130.2 448 26.8
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 2.2e-27 130.2 640 23.9
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 2.2e-27 130.2 492 26.4
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 2.2e-27 130.2 506 23.9
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 3.7e-27 129.4 613 23.2
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 3.7e-27 129.4 613 22.5
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 4.8e-27 129.0 635 23.8
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 8.2e-27 128.3 488 24.2
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 1.4e-26 127.5 613 22.7
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 2.4e-26 126.7 623 22.8
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 4.1e-26 125.9 611 24.9
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 5.3e-26 125.6 610 24.6
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 5.3e-26 125.6 490 23.7
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 5.3e-26 125.6 601 22.8
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 5.3e-26 125.6 613 22.5
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 5.3e-26 125.6 541 25.0
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 5.3e-26 125.6 521 24.8
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 6.9e-26 125.2 641 23.9
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.2e-25 124.4 405 25.2
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 2.0e-25 123.6 622 22.7
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 2.0e-25 123.6 492 24.0
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 2.6e-25 123.2 489 24.5
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 3.4e-25 122.9 548 25.5
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 3.4e-25 122.9 405 24.4
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 4.5e-25 122.5 636 24.4
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.9e-24 119.8 634 23.8
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 5.0e-24 119.0 652 24.2
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 6.5e-24 118.6 611 24.4
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 6.5e-24 118.6 637 22.0
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 8.5e-24 118.2 630 23.5
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 8.5e-24 118.2 431 24.8
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 1.4e-23 117.5 515 23.7
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 1.4e-23 117.5 523 23.3
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 1.9e-23 117.1 677 23.0
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 4.2e-23 115.9 476 23.9
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 1.2e-22 114.4 573 23.6
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 1.6e-22 114.0 448 22.8
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 2.7e-22 113.2 557 24.6
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 3.6e-22 112.8 493 24.9
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 4.6e-22 112.5 343 27.1
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 6.1e-22 112.1 660 24.1
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.0e-21 111.3 666 22.5
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.3e-21 110.2 412 24.8
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 3.9e-21 109.4 506 23.5
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 6.7e-21 108.6 707 21.8
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 2.0e-20 107.1 635 21.9
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 4.3e-20 105.9 508 23.2
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 7.4e-20 105.1 484 23.3
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 1.3e-19 104.4 537 24.4
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 2.2e-19 103.6 320 26.9
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 3.7e-19 102.8 464 24.1
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.4e-17 96.3 498 22.5
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.4e-17 96.3 534 22.7
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 2.9e-16 93.2 538 21.9
AagrBONN_evm.TU.Sc2ySwM_368.2662 Anthoceros agrestis HOM05D005348 ORTHO05D006635 5.0e-16 92.4 484 23.3
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.0e-16 92.4 495 22.4
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 5.0e-16 92.4 386 23.3
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.5e-16 92.0 681 22.0
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 1.2e-14 87.8 378 23.3
MapolyY_A0059 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.0e-13 84.7 84 50.0
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 6.7e-13 82.0 643 22.7
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 8.8e-13 81.6 433 23.3
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 5.7e-12 79.0 522 21.5
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 9.7e-12 78.2 372 24.7
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.8e-11 76.6 642 22.4
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 3.7e-11 76.3 373 24.9
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 9.1e-10 71.6 252 26.6
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 3.6e-06 59.7 147 27.2


User provided reference genes

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