Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.4e-89 332.8 156 100.0
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 7.4e-22 107.8 106 48.1
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 1.3e-21 107.1 96 49.0
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 6.3e-21 104.8 99 46.5
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 5.3e-20 101.7 98 46.9
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 1.2e-19 100.5 92 46.7
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 2.0e-19 99.8 74 55.4
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 2.0e-19 99.8 91 47.3
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 2.6e-19 99.4 65 61.5
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 3.5e-19 99.0 96 46.9
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 4.5e-19 98.6 74 52.7
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 4.5e-19 98.6 80 51.2
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 4.5e-19 98.6 72 52.8
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 4.5e-19 98.6 72 52.8
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 5.9e-19 98.2 64 59.4
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 7.7e-19 97.8 98 46.9
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 7.7e-19 97.8 83 50.6
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 7.7e-19 97.8 69 55.1
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.0e-18 97.4 99 45.5
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 1.3e-18 97.1 92 46.7
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 1.7e-18 96.7 65 56.9
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 2.2e-18 96.3 86 47.7
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 2.9e-18 95.9 82 51.2
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 3.8e-18 95.5 89 44.9
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 5.0e-18 95.1 65 56.9
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 6.5e-18 94.7 73 53.4
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 6.5e-18 94.7 79 50.6
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 6.5e-18 94.7 65 55.4
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 1.4e-17 93.6 96 45.8
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 1.9e-17 93.2 64 54.7
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 3.2e-17 92.4 65 55.4
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 3.2e-17 92.4 69 52.2
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 3.2e-17 92.4 85 45.9
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 3.2e-17 92.4 65 53.8
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.2e-16 90.5 65 55.4
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 1.6e-16 90.1 74 47.3
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 1.6e-16 90.1 71 49.3
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 3.6e-16 89.0 81 45.7
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 6.1e-16 88.2 89 41.6
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 1.4e-15 87.0 65 53.8
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 6.7e-15 84.7 70 50.0
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 3.3e-14 82.4 71 45.1
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 9.7e-14 80.9 65 50.8
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 1.3e-13 80.5 64 53.1
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.1e-12 77.4 71 46.5
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.4e-12 77.0 72 44.4
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 1.4e-12 77.0 91 38.5
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.4e-12 76.3 65 47.7
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 2.4e-12 76.3 65 47.7
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 5.9e-11 71.6 69 43.5
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 5.9e-11 71.6 77 41.6
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 7.7e-11 71.2 77 40.3
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.0e-10 70.9 67 43.3
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.3e-10 70.5 65 46.2
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 2.2e-10 69.7 78 41.0
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 2.2e-10 69.7 78 41.0
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 2.2e-10 69.7 67 41.8
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.8e-10 68.9 87 36.8
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 5.0e-10 68.6 67 41.8
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 6.5e-10 68.2 67 46.3
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 6.5e-10 68.2 65 44.6
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 8.5e-10 67.8 65 43.1
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.1e-09 67.4 114 32.5
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 1.5e-09 67.0 54 48.1
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 1.9e-09 66.6 114 32.5
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.5e-09 66.2 67 41.8
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 2.5e-09 66.2 81 45.7
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.5e-09 66.2 53 50.9
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 5.5e-09 65.1 65 40.0
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 7.2e-09 64.7 88 35.2
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 2.1e-08 63.2 57 49.1
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 2.1e-08 63.2 67 47.8
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.1e-08 63.2 47 51.1
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 2.7e-08 62.8 92 33.7
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 3.6e-08 62.4 61 49.2
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 6.1e-08 61.6 83 31.3
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 1.0e-07 60.8 62 45.2
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 1.0e-07 60.8 61 45.9
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 1.4e-07 60.5 111 30.6
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 2.3e-07 59.7 70 38.6
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.2e-06 57.4 49 44.9
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 4.4e-06 55.5 65 38.5


User provided reference genes

Program Settings