Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 2.2e-85 318.9 164 100.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 6.6e-29 131.3 143 47.6
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 8.9e-26 120.9 116 45.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 2.6e-25 119.4 142 43.7
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 7.5e-25 117.9 128 46.9
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 4.9e-24 115.2 142 42.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.4e-23 113.6 142 40.1
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 2.4e-23 112.8 154 37.7
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 4.1e-23 112.1 150 38.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 7.1e-23 111.3 142 40.1
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.2e-22 110.5 147 38.1
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.1e-22 109.8 149 40.3
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 2.1e-22 109.8 120 47.5
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 2.7e-22 109.4 142 41.5
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 2.7e-22 109.4 142 38.7
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 2.7e-22 109.4 144 41.0
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 7.8e-22 107.8 147 36.7
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 7.8e-22 107.8 142 38.7
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.0e-21 107.5 142 38.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.7e-21 106.7 142 38.0
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 1.7e-21 106.7 126 42.1
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.7e-21 106.7 144 39.6
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.3e-21 106.3 144 38.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 3.0e-21 105.9 127 40.9
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 3.0e-21 105.9 144 39.6
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.9e-21 105.5 142 38.7
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 3.9e-21 105.5 120 44.2
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 5.1e-21 105.1 119 42.9
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 5.1e-21 105.1 142 36.6
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 5.1e-21 105.1 120 41.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 6.6e-21 104.8 144 38.9
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 8.6e-21 104.4 142 38.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.5e-20 103.6 142 37.3
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.5e-20 103.6 120 41.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.5e-20 103.6 133 40.6
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.5e-20 103.6 142 37.3
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.5e-20 103.6 120 44.2
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.9e-20 103.2 120 41.7
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.9e-20 103.2 142 35.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.5e-20 102.8 120 43.3
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.5e-20 102.8 119 44.5
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.5e-20 102.8 118 42.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.3e-20 102.4 149 36.2
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 3.3e-20 102.4 142 38.7
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.3e-20 102.4 151 35.8
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 3.3e-20 102.4 120 42.5
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 4.3e-20 102.1 142 38.0
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 5.6e-20 101.7 142 38.7
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 5.6e-20 101.7 142 38.0
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 5.6e-20 101.7 120 41.7
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 9.5e-20 100.9 144 38.2
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 9.5e-20 100.9 142 37.3
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 9.5e-20 100.9 174 33.3
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 9.5e-20 100.9 142 37.3
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.2e-19 100.5 148 35.8
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.2e-19 100.5 142 35.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.2e-19 100.5 120 40.8
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.2e-19 100.5 132 37.9
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.1e-19 99.8 180 33.9
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.8e-19 99.4 149 36.2
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 2.8e-19 99.4 142 36.6
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 8.1e-19 97.8 122 37.7
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 8.1e-19 97.8 142 35.2
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 8.1e-19 97.8 152 35.5
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.1e-18 97.4 119 39.5
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.8e-18 96.7 146 32.9
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.4e-18 96.3 142 34.5
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.4e-18 96.3 143 36.4
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.4e-18 96.3 166 33.7
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 3.1e-18 95.9 120 39.2
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.0e-18 95.5 109 45.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 6.8e-18 94.7 120 40.0
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 8.9e-18 94.4 143 37.8
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 8.9e-18 94.4 142 33.8
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.2e-17 94.0 118 37.3
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.2e-17 94.0 119 40.3
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.0e-17 93.2 116 40.5
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.0e-17 93.2 120 37.5
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 2.6e-17 92.8 142 35.2
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 2.6e-17 92.8 142 35.2
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 2.6e-17 92.8 142 35.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 3.4e-17 92.4 142 35.9
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 4.4e-17 92.0 150 34.7
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 4.4e-17 92.0 150 34.7
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 9.9e-17 90.9 160 33.1
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.7e-16 90.1 128 35.9
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 3.8e-16 89.0 134 34.3
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 6.4e-16 88.2 150 33.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 6.4e-16 88.2 150 34.0
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 6.4e-16 88.2 144 36.1
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.1e-15 87.4 142 35.2
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.1e-15 87.4 142 35.2
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.6e-14 83.6 98 41.8
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.6e-14 83.6 104 41.3
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 7.8e-14 81.3 117 35.0
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.3e-13 80.5 120 35.8
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 5.1e-13 78.6 96 41.7
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 6.6e-13 78.2 105 40.0
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 6.6e-13 78.2 148 30.4
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.9e-12 76.6 123 33.3
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 4.7e-11 72.0 116 35.3
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.4e-09 65.5 85 38.8
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.6e-09 64.7 76 42.1
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.4e-07 60.5 73 42.5
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.9e-07 60.1 105 36.2
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.2e-06 57.4 69 39.1
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 2.7e-06 56.2 67 40.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.8e-06 54.7 75 37.3


User provided reference genes

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