Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0034s0075 Marchantia polymorpha HOM05D006986 ORTHO05D008714 1.4e-99 366.3 192 100.0
Pp3c19_10980 Physcomitrium patens HOM05D006986 ORTHO05D008714 1.8e-14 83.6 195 38.5
SEGI_39902 Sequoiadendron giganteum HOM05D006986 ORTHO05D008714 7.8e-13 78.2 105 43.8
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 4.7e-10 68.9 74 45.9
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.0e-09 67.8 88 38.6
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 2.3e-09 66.6 95 37.9
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 3.1e-09 66.2 184 33.2
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 6.8e-09 65.1 88 37.5
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 1.2e-08 64.3 57 52.6
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.5e-08 63.9 88 36.4
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 2.6e-08 63.2 86 37.2
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 3.4e-08 62.8 89 38.2
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 4.4e-08 62.4 86 36.0
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 5.8e-08 62.0 105 40.0
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 1.3e-07 60.8 88 35.2
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 1.7e-07 60.5 105 34.3
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 2.9e-07 59.7 98 35.7
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 2.9e-07 59.7 59 44.1
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 2.9e-07 59.7 59 44.1
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 3.7e-07 59.3 186 26.9
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 4.9e-07 58.9 100 48.0
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 4.9e-07 58.9 182 29.7
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 8.3e-07 58.2 44 50.0
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 8.3e-07 58.2 44 50.0
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 8.3e-07 58.2 56 42.9
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 8.3e-07 58.2 94 37.2
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 8.3e-07 58.2 150 30.0
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 8.3e-07 58.2 118 32.2
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 8.3e-07 58.2 98 36.7
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 8.3e-07 58.2 115 29.6
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 8.3e-07 58.2 68 41.2
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 1.1e-06 57.8 76 44.7
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 1.1e-06 57.8 99 33.3
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 1.9e-06 57.0 67 41.8
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 1.9e-06 57.0 67 41.8
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 1.9e-06 57.0 67 41.8
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 1.9e-06 57.0 96 39.6
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 1.9e-06 57.0 98 33.7
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 2.4e-06 56.6 103 33.0
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 3.2e-06 56.2 94 42.6
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 3.2e-06 56.2 65 41.5
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 3.2e-06 56.2 109 38.5
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 3.2e-06 56.2 57 42.1
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 3.2e-06 56.2 87 32.2
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 3.2e-06 56.2 87 32.2
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 4.1e-06 55.8 155 35.5
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 5.4e-06 55.5 55 41.8
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 5.4e-06 55.5 99 35.4
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 5.4e-06 55.5 55 41.8
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 5.4e-06 55.5 59 39.0
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 5.4e-06 55.5 66 39.4
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 7.0e-06 55.1 54 46.3
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 7.0e-06 55.1 79 34.2
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 7.0e-06 55.1 99 35.4
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 7.0e-06 55.1 121 31.4
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 7.0e-06 55.1 103 32.0
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 7.0e-06 55.1 103 32.0


User provided reference genes

Program Settings