Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 6.1e-159 564.3 327 100.0
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.1e-46 191.4 298 40.3
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 5.7e-40 169.1 302 39.1
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.8e-31 140.2 266 35.7
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 9.1e-30 135.2 265 35.8
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.3e-28 131.3 265 33.2
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.3e-28 131.3 265 33.2
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 1.2e-26 124.8 301 32.2
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 2.7e-26 123.6 292 32.2
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 8.0e-26 122.1 268 32.5
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 1.0e-25 121.7 293 30.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.4e-25 121.3 234 37.2
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.8e-25 120.9 266 34.6
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 1.8e-25 120.9 319 31.0
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 1.8e-25 120.9 286 32.2
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.3e-25 120.6 297 33.0
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.3e-25 120.6 349 32.7
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 3.0e-25 120.2 269 35.7
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 8.8e-25 118.6 141 44.7
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.2e-24 118.2 294 32.3
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.5e-24 117.9 311 31.8
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.0e-24 117.5 271 32.8
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 2.0e-24 117.5 328 31.7
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.6e-24 117.1 294 31.3
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.6e-24 117.1 311 31.8
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 3.4e-24 116.7 265 35.5
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 3.4e-24 116.7 311 31.8
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 3.4e-24 116.7 311 31.8
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 3.4e-24 116.7 330 31.5
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 7.5e-24 115.5 265 33.2
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 7.5e-24 115.5 334 29.3
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 1.3e-23 114.8 306 29.7
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 1.7e-23 114.4 265 33.6
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 1.7e-23 114.4 269 32.7
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.7e-23 114.4 296 29.4
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.8e-23 113.6 270 31.1
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 2.8e-23 113.6 270 31.1
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 3.7e-23 113.2 317 30.3
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 3.7e-23 113.2 297 34.0
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 3.7e-23 113.2 297 32.3
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 4.8e-23 112.8 297 30.3
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 4.8e-23 112.8 268 32.5
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 4.8e-23 112.8 142 45.1
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 4.8e-23 112.8 287 31.4
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 6.3e-23 112.5 142 44.4
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 6.3e-23 112.5 263 32.3
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 8.3e-23 112.1 266 32.0
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 8.3e-23 112.1 268 32.8
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 1.1e-22 111.7 141 44.0
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.1e-22 111.7 271 33.2
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.4e-22 111.3 314 32.5
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.8e-22 110.9 303 31.7
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.8e-22 110.9 303 31.7
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 1.8e-22 110.9 225 33.8
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 2.4e-22 110.5 292 30.5
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.4e-22 110.5 301 32.9
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.4e-22 110.5 297 33.3
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 2.4e-22 110.5 290 31.0
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 4.1e-22 109.8 270 30.7
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 4.1e-22 109.8 267 31.8
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 4.1e-22 109.8 267 32.6
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 7.0e-22 109.0 265 31.7
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.2e-21 108.2 155 39.4
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.2e-21 108.2 237 32.9
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 2.7e-21 107.1 232 34.9
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.7e-21 107.1 223 32.7
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.7e-21 107.1 282 34.8
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 3.5e-21 106.7 147 44.9
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.5e-21 106.7 230 37.4
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 3.5e-21 106.7 228 32.5
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 7.7e-21 105.5 178 38.2
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.0e-20 105.1 225 35.1
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.0e-20 105.1 293 30.0
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 2.9e-20 103.6 190 35.3
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.8e-20 103.2 265 29.1
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 3.8e-20 103.2 323 30.0
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 5.0e-20 102.8 233 35.6
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 5.0e-20 102.8 146 41.1
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 6.5e-20 102.4 301 28.2
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.1e-19 101.7 232 31.9
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.5e-19 101.3 277 28.5
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.5e-19 101.3 179 36.9
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 1.5e-19 101.3 188 34.6
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.5e-19 100.5 137 42.3
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 2.5e-19 100.5 265 30.2
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 3.2e-19 100.1 291 29.6
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 3.2e-19 100.1 277 31.8
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 4.2e-19 99.8 336 27.7
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 4.2e-19 99.8 303 30.7
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 5.5e-19 99.4 264 29.2
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 5.5e-19 99.4 264 29.2
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 7.2e-19 99.0 223 32.7
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 9.4e-19 98.6 232 33.2
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 1.6e-18 97.8 290 29.3
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 2.1e-18 97.4 297 27.6
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 2.7e-18 97.1 287 30.0
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 4.7e-18 96.3 292 29.5
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 4.7e-18 96.3 298 27.2
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 1.0e-17 95.1 277 29.2
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 3.0e-17 93.6 223 29.6
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 3.0e-17 93.6 227 32.2
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.5e-16 91.3 284 27.1
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 2.0e-16 90.9 140 38.6
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 2.0e-16 90.9 305 29.8
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 8.3e-15 85.5 343 28.0
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 2.4e-14 84.0 213 33.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 3.1e-14 83.6 267 26.6
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 1.6e-13 81.3 250 29.6
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 7.7e-13 79.0 157 36.9
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 2.9e-12 77.0 96 49.0
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 3.8e-12 76.6 262 28.6
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.2e-10 71.6 205 30.2
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 2.8e-10 70.5 216 30.1
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 4.7e-10 69.7 265 25.3
PRCOL_00003382 Prasinoderma coloniale HOM05D006904 ORTHO05D008439 4.9e-07 59.7 156 30.8


User provided reference genes

Program Settings