Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 1.9e-87 325.9 171 100.0
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 1.5e-44 183.3 168 63.1
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 2.9e-43 179.1 177 58.8
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 6.4e-43 177.9 168 63.1
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 8.4e-43 177.6 166 62.0
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 1.1e-42 177.2 161 61.5
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 3.2e-42 175.6 164 58.5
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 7.1e-42 174.5 168 61.3
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 9.3e-42 174.1 163 60.7
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 1.6e-41 173.3 166 60.8
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 2.1e-41 172.9 166 61.4
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 4.6e-41 171.8 166 62.0
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 4.6e-41 171.8 168 58.9
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 6.0e-41 171.4 167 60.5
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 1.7e-40 169.9 182 56.6
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 3.0e-40 169.1 167 60.5
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 3.0e-40 169.1 175 58.3
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 5.1e-40 168.3 166 59.0
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 6.6e-40 167.9 165 58.8
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 6.6e-40 167.9 174 58.0
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 8.7e-40 167.5 171 59.1
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 8.7e-40 167.5 169 58.6
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 1.1e-39 167.2 172 57.6
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 1.1e-39 167.2 177 56.5
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 1.5e-39 166.8 167 59.9
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 1.9e-39 166.4 165 59.4
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 1.9e-39 166.4 182 56.0
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 2.5e-39 166.0 170 55.9
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 2.5e-39 166.0 161 62.1
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 3.3e-39 165.6 180 57.8
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 7.3e-39 164.5 161 62.1
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 9.6e-39 164.1 189 55.0
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 9.6e-39 164.1 169 58.6
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 9.6e-39 164.1 173 56.6
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 1.6e-38 163.3 179 58.7
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 1.6e-38 163.3 180 55.0
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 2.1e-38 162.9 181 55.2
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 2.1e-38 162.9 170 57.1
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 2.8e-38 162.5 163 59.5
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 3.6e-38 162.2 162 58.6
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 8.1e-38 161.0 188 52.1
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 2.4e-37 159.5 188 53.7
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 2.4e-37 159.5 170 58.2
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 3.1e-37 159.1 102 81.4
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 6.9e-37 157.9 181 53.0
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.5e-36 156.8 226 46.9
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 1.5e-36 156.8 187 53.5
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 1.5e-36 156.8 162 59.9
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 2.0e-36 156.4 180 52.2
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.0e-36 156.4 169 55.6
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 5.8e-36 154.8 171 57.9
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 1.3e-35 153.7 189 52.4
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 1.7e-35 153.3 208 49.0
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 2.2e-35 152.9 179 52.5
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 2.2e-35 152.9 186 53.8
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 2.9e-35 152.5 201 51.2
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 4.9e-35 151.8 182 51.6
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 8.4e-35 151.0 165 56.4
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 1.1e-34 150.6 113 72.6
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 1.9e-34 149.8 161 58.4
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 1.9e-34 149.8 193 49.7
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 4.2e-34 148.7 200 48.0
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 4.2e-34 148.7 166 56.6
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.2e-33 147.1 165 53.9
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 2.7e-33 146.0 172 54.1
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 6.0e-33 144.8 173 51.4
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.3e-30 137.1 163 50.9
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 1.8e-29 133.3 143 51.7
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 9.0e-29 131.0 161 50.3
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 3.4e-28 129.0 167 53.3
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 4.5e-28 128.6 153 51.6
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.6e-28 127.9 165 50.3
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 1.7e-27 126.7 178 48.3
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 2.2e-27 126.3 170 48.8
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.9e-27 125.9 170 48.8
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 5.4e-26 121.7 181 47.5
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 2.7e-25 119.4 171 50.3
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.7e-25 119.4 160 48.8
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 2.8e-22 109.4 165 48.5
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 2.8e-22 109.4 168 44.6
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 4.8e-22 108.6 150 49.3
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 8.1e-22 107.8 144 47.9
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 9.0e-21 104.4 218 39.0
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 3.4e-20 102.4 54 96.3
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.3e-19 100.5 57 91.2
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 1.3e-19 100.5 52 98.1
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 2.9e-19 99.4 52 96.2
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 2.9e-19 99.4 52 96.2
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 6.5e-19 98.2 52 94.2
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 6.5e-19 98.2 52 94.2
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 2.5e-18 96.3 52 92.3
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 5.5e-18 95.1 147 45.6
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 1.8e-16 90.1 149 47.7
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 6.7e-16 88.2 165 37.6
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 4.3e-15 85.5 157 39.5
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 5.7e-15 85.1 179 36.9
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 5.7e-15 85.1 48 89.6
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 5.7e-15 85.1 48 89.6
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 5.3e-13 78.6 128 44.5
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 1.2e-12 77.4 117 46.2
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 1.5e-12 77.0 37 100.0
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 3.8e-11 72.4 118 39.0
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 3.8e-11 72.4 121 38.8
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 5.0e-11 72.0 140 37.9
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 5.0e-11 72.0 119 42.0
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 8.4e-11 71.2 124 41.9
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 1.4e-10 70.5 167 33.5
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 4.2e-10 68.9 137 38.7
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.6e-09 67.0 36 97.2
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 2.7e-09 66.2 137 35.0
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 2.7e-09 66.2 108 43.5
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 2.7e-09 66.2 36 94.4
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 6.1e-09 65.1 53 58.5
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 5.1e-08 62.0 42 78.6
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 2.5e-07 59.7 37 86.5
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 7.4e-07 58.2 35 85.7
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 1.6e-06 57.0 109 34.9


User provided reference genes

Program Settings