Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0040 Marchantia polymorpha HOM05D000489 ORTHO05D000372 2.4e-87 325.5 163 100.0
TWI75G1268 Tripterygium wilfordii HOM05D000489 ORTHO05D000372 4.9e-08 62.0 101 32.7
HanXRQChr04g0119001 Helianthus annuus HOM05D000489 ORTHO05D000372 6.4e-08 61.6 90 38.9
Thhalv10021660m.g Eutrema salsugineum HOM05D000489 ORTHO05D000372 1.4e-07 60.5 112 29.5
Lsat_1_v5_gn_8_56821 Lactuca sativa HOM05D000489 ORTHO05D000372 1.4e-07 60.5 90 37.8
HanXRQChr01g0022311 Helianthus annuus HOM05D000489 ORTHO05D000372 2.4e-07 59.7 106 33.0
HanXRQChr10g0310011 Helianthus annuus HOM05D000489 ORTHO05D000372 3.2e-07 59.3 92 34.8
Lsat_1_v5_gn_1_71801 Lactuca sativa HOM05D000489 ORTHO05D000372 3.2e-07 59.3 89 33.7
Lsat_1_v5_gn_8_56861 Lactuca sativa HOM05D000489 ORTHO05D000372 3.2e-07 59.3 94 37.2
TAR365G0864 Trochodendron aralioides HOM05D000489 ORTHO05D000372 3.2e-07 59.3 85 34.1
Atru.chr5.1477 Acer truncatum HOM05D000489 ORTHO05D000372 4.1e-07 58.9 97 33.0
Lsat_1_v5_gn_8_56900 Lactuca sativa HOM05D000489 ORTHO05D000372 4.1e-07 58.9 80 41.2
Rhsim04G0200200 Rhododendron simsii HOM05D000489 ORTHO05D000372 4.1e-07 58.9 103 34.0
TAR636G3306 Trochodendron aralioides HOM05D000489 ORTHO05D000372 4.1e-07 58.9 90 36.7
ECA236G1545 Erigeron canadensis HOM05D000489 ORTHO05D000372 5.4e-07 58.5 89 37.1
Gohir.D11G129700 Gossypium hirsutum HOM05D000489 ORTHO05D000372 5.4e-07 58.5 99 34.3
HanXRQChr10g0310021 Helianthus annuus HOM05D000489 ORTHO05D000372 5.4e-07 58.5 92 34.8
Potri.005G211900 Populus trichocarpa HOM05D000489 ORTHO05D000372 7.1e-07 58.2 83 34.9
HanXRQChr10g0310031 Helianthus annuus HOM05D000489 ORTHO05D000372 9.2e-07 57.8 80 37.5
HanXRQChr14g0435961 Helianthus annuus HOM05D000489 ORTHO05D000372 9.2e-07 57.8 86 33.7
Lsat_1_v5_gn_2_44840 Lactuca sativa HOM05D000489 ORTHO05D000372 9.2e-07 57.8 85 34.1
THA.LOC104817558 Tarenaya hassleriana HOM05D000489 ORTHO05D000372 9.2e-07 57.8 100 33.0
Ciclev10022412m.g Citrus clementina HOM05D000489 ORTHO05D000372 1.2e-06 57.4 78 37.2
Cc01_g19240 Coffea canephora HOM05D000489 ORTHO05D000372 1.2e-06 57.4 80 37.5
Lsat_1_v5_gn_2_44900 Lactuca sativa HOM05D000489 ORTHO05D000372 1.2e-06 57.4 92 32.6
Prupe.8G237900 Prunus persica HOM05D000489 ORTHO05D000372 1.2e-06 57.4 85 35.3
THA.LOC104803040 Tarenaya hassleriana HOM05D000489 ORTHO05D000372 1.2e-06 57.4 108 30.6
Cc03_g04020 Coffea canephora HOM05D000489 ORTHO05D000372 1.6e-06 57.0 95 34.7
Eucgr.K03348 Eucalyptus grandis HOM05D000489 ORTHO05D000372 1.6e-06 57.0 97 34.0
Manes.05G079400 Manihot esculenta HOM05D000489 ORTHO05D000372 1.6e-06 57.0 86 34.9
PSO832G3499 Papaver somniferum HOM05D000489 ORTHO05D000372 1.6e-06 57.0 97 35.1
Sabra05G0161900 Salix brachista HOM05D000489 ORTHO05D000372 1.6e-06 57.0 99 34.3
Thecc.01G274900 Theobroma cacao HOM05D000489 ORTHO05D000372 1.6e-06 57.0 94 33.0
ECA247G3313 Erigeron canadensis HOM05D000489 ORTHO05D000372 2.1e-06 56.6 84 36.9
Rhsim04G0200800 Rhododendron simsii HOM05D000489 ORTHO05D000372 2.7e-06 56.2 96 32.3
Rhsim13G0026800 Rhododendron simsii HOM05D000489 ORTHO05D000372 2.7e-06 56.2 73 38.4
CANSAT78G1938 Cannabis sativa HOM05D000489 ORTHO05D000372 3.5e-06 55.8 88 34.1
Gorai.007G138700 Gossypium raimondii HOM05D000489 ORTHO05D000372 3.5e-06 55.8 99 32.3
SalBow4G3097 Salvia bowleyana HOM05D000489 ORTHO05D000372 3.5e-06 55.8 96 34.4
vmacro02593 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 3.5e-06 55.8 92 31.5
Gohir.A11G124500 Gossypium hirsutum HOM05D000489 ORTHO05D000372 4.6e-06 55.5 97 33.0
Peaxi162Scf00783g00133 Petunia axillaris HOM05D000489 ORTHO05D000372 4.6e-06 55.5 80 35.0
SalBow4G3230 Salvia bowleyana HOM05D000489 ORTHO05D000372 4.6e-06 55.5 87 35.6
vmacro15354 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 4.6e-06 55.5 83 33.7
arahy.Tifrunner.gnm1.ann1.LF2RWL Arachis hypogaea HOM05D000489 ORTHO05D000372 6.0e-06 55.1 81 34.6
Hma1.2p1_0822F.1_g224270 Hydrangea macrophylla HOM05D000489 ORTHO05D000372 6.0e-06 55.1 90 32.2
MSTRG.18251 Avicennia marina HOM05D000489 ORTHO05D000372 7.8e-06 54.7 87 35.6
AUR62026966 Chenopodium quinoa HOM05D000489 ORTHO05D000372 7.8e-06 54.7 95 33.7
Ciclev10021499m.g Citrus clementina HOM05D000489 ORTHO05D000372 7.8e-06 54.7 101 28.7
Migut.G00355 Erythranthe guttata HOM05D000489 ORTHO05D000372 7.8e-06 54.7 85 35.3
SMO304G0142 Selaginella moellendorffii HOM05D001204 ORTHO05D001428 7.8e-06 54.7 64 42.2


User provided reference genes

Program Settings