Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0039 Marchantia polymorpha HOM05D001204 ORTHO05D001428 4.3e-56 221.1 112 100.0
Manes.03G068100 Manihot esculenta HOM05D001204 ORTHO05D001428 1.2e-08 63.5 99 35.4
Oeu041510.1 Olea europaea HOM05D001204 ORTHO05D001428 9.8e-08 60.5 98 33.7
Gohir.A08G026640 Gossypium hirsutum HOM05D001204 ORTHO05D001428 2.2e-07 59.3 104 32.7
Gohir.D08G037101 Gossypium hirsutum HOM05D001204 ORTHO05D001428 2.2e-07 59.3 104 32.7
Gorai.004G035100 Gossypium raimondii HOM05D001204 ORTHO05D001428 2.2e-07 59.3 104 32.7
TWI60G1209 Tripterygium wilfordii HOM05D001204 ORTHO05D001428 2.2e-07 59.3 94 35.1
HanXRQChr04g0117421 Helianthus annuus HOM05D001204 ORTHO05D001428 3.7e-07 58.5 98 31.6
TWI09G1507 Tripterygium wilfordii HOM05D001204 ORTHO05D001428 4.8e-07 58.2 102 34.3
COL.COLO4_16508 Corchorus olitorius HOM05D001204 ORTHO05D001428 1.1e-06 57.0 85 34.1
FAN01G0173 Fragaria x ananassa HOM05D001204 ORTHO05D001428 1.1e-06 57.0 103 33.0
FAN14G5429 Fragaria x ananassa HOM05D001204 ORTHO05D001428 1.1e-06 57.0 103 33.0
PGR102G1670 Punica granatum HOM05D001204 ORTHO05D001428 1.4e-06 56.6 101 32.7
VMungo1383G2079 Vigna mungo HOM05D001204 ORTHO05D001428 1.4e-06 56.6 102 35.3
Duzib268G0191 Durio zibethinus HOM05D001204 ORTHO05D001428 1.8e-06 56.2 100 32.0
Migut.B01405 Erythranthe guttata HOM05D001204 ORTHO05D001428 1.8e-06 56.2 100 34.0
FvH4_7g00060 Fragaria vesca HOM05D001204 ORTHO05D001428 1.8e-06 56.2 79 35.4
FAN06G2784 Fragaria x ananassa HOM05D001204 ORTHO05D001428 1.8e-06 56.2 79 35.4
FAN10G4238 Fragaria x ananassa HOM05D001204 ORTHO05D001428 1.8e-06 56.2 79 35.4
Lalb_Chr01g0009351 Lupinus albus HOM05D001204 ORTHO05D001428 1.8e-06 56.2 72 34.7
MD07G1000800 Malus domestica HOM05D001204 ORTHO05D001428 1.8e-06 56.2 102 33.3
QL04p001667 Quercus lobata HOM05D001204 ORTHO05D001428 1.8e-06 56.2 100 32.0
RcHm_v2.0_Chr1g0313181 Rosa chinensis HOM05D001204 ORTHO05D001428 1.8e-06 56.2 79 35.4
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 2.4e-06 55.8 84 40.5
Lj2P716T7 Lonicera japonica HOM05D001204 ORTHO05D001428 2.4e-06 55.8 72 37.5
vmacro04216 Vaccinium macrocarpon HOM05D001204 ORTHO05D001428 2.4e-06 55.8 91 35.2
Cc06_g09270 Coffea canephora HOM05D001204 ORTHO05D001428 3.1e-06 55.5 106 31.1
MD03G1007900 Malus domestica HOM05D001204 ORTHO05D001428 3.1e-06 55.5 70 42.9
Lsat_1_v5_gn_7_33800 Lactuca sativa HOM05D001204 ORTHO05D001428 4.1e-06 55.1 107 29.9
Lj1P459T0 Lonicera japonica HOM05D001204 ORTHO05D001428 4.1e-06 55.1 106 34.9
TWI32G0741 Tripterygium wilfordii HOM05D001204 ORTHO05D001428 4.1e-06 55.1 96 31.2
CAN.G1361.3 Capsicum annuum HOM05D001204 ORTHO05D001428 5.4e-06 54.7 75 38.7
Manes.10G152900 Manihot esculenta HOM05D001204 ORTHO05D001428 5.4e-06 54.7 106 29.2
Cpa.g.sc1500.3 Carica papaya HOM05D001204 ORTHO05D001428 7.0e-06 54.3 77 36.4
Eucgr.B03623 Eucalyptus grandis HOM05D001204 ORTHO05D001428 7.0e-06 54.3 100 33.0
Peaxi162Scf00402g00931 Petunia axillaris HOM05D001204 ORTHO05D001428 7.0e-06 54.3 100 33.0
SalBow4G0134 Salvia bowleyana HOM05D001204 ORTHO05D001428 7.0e-06 54.3 77 33.8
Solyc01g073680.4 Solanum lycopersicum HOM05D001204 ORTHO05D001428 7.0e-06 54.3 100 33.0
Sopen01g033240 Solanum pennellii HOM05D001204 ORTHO05D001428 7.0e-06 54.3 100 33.0
vmacro22465 Vaccinium macrocarpon HOM05D001204 ORTHO05D001428 7.0e-06 54.3 98 28.6
Actinidia05840 Actinidia chinensis HOM05D001204 ORTHO05D001428 9.1e-06 53.9 107 31.8
CsaV3_4G023430 Cucumis sativus L. HOM05D001204 ORTHO05D001428 9.1e-06 53.9 102 34.3
Glyma.11G256100 Glycine max HOM05D001204 ORTHO05D001428 9.1e-06 53.9 95 33.7
Potri.001G008500 Populus trichocarpa HOM05D001204 ORTHO05D001428 9.1e-06 53.9 105 32.4
Prupe.6G009900 Prunus persica HOM05D001204 ORTHO05D001428 9.1e-06 53.9 70 40.0
Sabra16G0138800 Salix brachista HOM05D001204 ORTHO05D001428 9.1e-06 53.9 105 29.5
SalBow4G0146 Salvia bowleyana HOM05D001204 ORTHO05D001428 9.1e-06 53.9 98 28.6
PGSC0003DMG400028977 Solanum tuberosum HOM05D001204 ORTHO05D001428 9.1e-06 53.9 100 33.0


User provided reference genes

Program Settings