Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 5.7e-126 454.5 273 100.0
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 5.8e-22 109.0 190 41.1
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.3e-16 91.3 163 33.1
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.4e-15 87.8 154 33.1
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.8e-15 87.4 164 37.2
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.8e-15 87.4 159 34.6
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.8e-15 87.4 202 37.1
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 5.3e-15 85.9 197 29.4
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 5.3e-15 85.9 132 34.8
Pp3c26_11940 Physcomitrium patens HOM05D022662 ORTHO05D006223 9.0e-15 85.1 199 31.7
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.5e-14 84.3 153 32.7
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 2.0e-14 84.0 141 34.0
Pp3c3_3640 Physcomitrium patens HOM05D022662 ORTHO05D006223 3.4e-14 83.2 248 35.5
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 4.5e-14 82.8 157 33.1
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 1.0e-13 81.6 175 33.1
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-13 81.3 156 35.9
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.3e-13 81.3 196 30.1
Pp3c3_10930 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.3e-13 81.3 164 33.5
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 1.3e-13 81.3 158 38.6
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.7e-13 80.9 160 31.9
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 3.8e-13 79.7 134 33.6
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 1.4e-12 77.8 142 32.4
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.4e-12 77.8 146 34.2
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.9e-12 77.4 162 29.6
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.9e-12 77.4 169 33.1
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 2.5e-12 77.0 199 30.2
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 3.2e-12 76.6 119 34.5
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 3.2e-12 76.6 134 34.3
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 4.2e-12 76.3 173 29.5
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 4.2e-12 76.3 172 32.0
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.2e-12 76.3 151 31.1
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 5.5e-12 75.9 142 31.0
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 5.5e-12 75.9 159 32.7
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.6e-11 74.3 199 34.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 2.1e-11 73.9 165 32.1
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 2.7e-11 73.6 165 32.1
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 3.5e-11 73.2 128 33.6
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 4.6e-11 72.8 204 29.4
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 6.1e-11 72.4 166 28.9
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 7.9e-11 72.0 151 30.5
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 7.9e-11 72.0 141 33.3
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 7.9e-11 72.0 141 33.3
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 7.9e-11 72.0 156 33.3
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 1.0e-10 71.6 251 26.3
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.0e-10 71.6 172 32.6
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 1.3e-10 71.2 167 30.5
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.8e-10 70.9 149 31.5
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.3e-10 70.5 151 29.8
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 2.3e-10 70.5 135 31.1
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 2.3e-10 70.5 163 28.2
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 3.9e-10 69.7 142 33.1
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 5.1e-10 69.3 194 29.4
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 5.1e-10 69.3 146 31.5
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 6.7e-10 68.9 116 31.0
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 8.7e-10 68.6 200 27.5
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.1e-09 68.2 170 31.2
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.9e-09 67.4 171 29.2
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 1.9e-09 67.4 126 35.7
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.9e-09 67.4 152 27.6
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 2.5e-09 67.0 71 39.4
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 3.3e-09 66.6 171 28.1
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 5.7e-09 65.9 145 31.0
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 7.4e-09 65.5 204 29.9
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.6e-08 64.3 175 29.1
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 1.6e-08 64.3 120 30.0
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 2.2e-08 63.9 120 30.0
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.4e-07 61.2 80 36.2
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 1.8e-07 60.8 131 32.8
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 2.4e-07 60.5 71 39.4
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 2.4e-07 60.5 118 33.1
Pp3c6_3400 Physcomitrium patens HOM05D005423 ORTHO05D006223 2.4e-07 60.5 94 35.1
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 3.1e-07 60.1 139 34.5
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 4.1e-07 59.7 133 31.6
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 5.3e-07 59.3 133 29.3
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 5.3e-07 59.3 106 39.6
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 5.3e-07 59.3 71 38.0
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 5.3e-07 59.3 180 31.1
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 9.0e-07 58.5 123 32.5
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 1.2e-06 58.2 75 37.3
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 1.5e-06 57.8 133 27.8
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.0e-06 57.4 129 30.2
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 2.0e-06 57.4 128 30.5
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.6e-06 57.0 77 35.1
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 3.4e-06 56.6 156 28.2
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 4.5e-06 56.2 95 38.9
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 4.5e-06 56.2 71 35.2
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 4.5e-06 56.2 71 35.2
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.5e-06 56.2 129 30.2
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 4.5e-06 56.2 69 36.2
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 4.5e-06 56.2 69 36.2
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 5.9e-06 55.8 71 33.8
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 5.9e-06 55.8 131 29.0
Haze_14633 Corylus avellana HOM05D013024 ORTHO05D015548 5.9e-06 55.8 138 29.0
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 7.7e-06 55.5 131 29.8
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 7.7e-06 55.5 131 29.8
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 7.7e-06 55.5 69 37.7
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 1.0e-05 55.1 94 36.2


User provided reference genes

Program Settings