Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 5.1e-230 800.8 431 100.0
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 4.6e-21 106.7 176 33.0
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 6.6e-20 102.8 146 37.7
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.2e-18 96.3 173 35.8
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.2e-18 96.3 171 32.7
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.2e-18 96.3 146 38.4
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-17 95.1 146 37.7
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 6.8e-17 92.8 155 34.2
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 6.8e-17 92.8 169 36.1
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.8e-17 92.8 155 34.2
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.8e-17 92.8 169 36.1
Mapoly0175s0021 Marchantia polymorpha HOM05D004991 ORTHO05D006690 8.9e-17 92.4 128 43.8
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 1.2e-16 92.0 174 37.9
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 3.4e-16 90.5 166 36.7
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 3.4e-16 90.5 166 36.7
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 9.9e-16 89.0 166 33.7
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.7e-15 88.2 169 33.1
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 2.2e-15 87.8 140 36.4
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.2e-15 87.8 268 29.9
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 2.2e-15 87.8 191 29.3
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 1.1e-14 85.5 175 31.4
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-14 84.7 220 30.5
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-14 84.7 220 30.5
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.2e-14 84.0 195 31.3
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 3.2e-14 84.0 174 29.9
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.1e-14 83.6 178 30.3
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 4.1e-14 83.6 192 30.7
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 9.2e-14 82.4 164 32.3
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 1.2e-13 82.0 161 30.4
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 2.1e-13 81.3 156 35.3
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.5e-13 80.5 166 31.3
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 3.5e-13 80.5 187 32.1
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 4.6e-13 80.1 183 32.2
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 4.6e-13 80.1 216 26.9
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 6.0e-13 79.7 190 30.5
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 7.8e-13 79.3 183 31.7
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 7.8e-13 79.3 155 32.9
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 7.8e-13 79.3 138 33.3
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 7.8e-13 79.3 167 32.9
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 1.3e-12 78.6 139 35.3
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.7e-12 78.2 136 31.6
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.7e-12 78.2 157 32.5
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 2.3e-12 77.8 149 31.5
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 2.3e-12 77.8 169 29.6
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 3.0e-12 77.4 149 33.6
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 3.0e-12 77.4 166 28.9
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 3.9e-12 77.0 136 33.8
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 5.1e-12 76.6 184 29.9
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 6.6e-12 76.3 137 32.1
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 8.6e-12 75.9 152 30.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 1.1e-11 75.5 150 30.7
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.5e-11 75.1 208 29.3
Mapoly0833s0001 Marchantia polymorpha HOM05D007711 ORTHO05D009680 1.5e-11 75.1 114 41.2
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.9e-11 74.7 168 32.1
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 2.5e-11 74.3 169 28.4
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.5e-11 74.3 168 31.5
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 3.3e-11 73.9 184 29.3
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 4.3e-11 73.6 139 34.5
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.3e-11 73.6 139 33.8
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 5.6e-11 73.2 168 32.1
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 7.3e-11 72.8 165 27.3
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.3e-11 72.8 215 30.2
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 7.3e-11 72.8 167 28.7
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 1.2e-10 72.0 165 27.3
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 1.2e-10 72.0 165 27.3
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 2.8e-10 70.9 174 29.9
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 2.8e-10 70.9 257 28.4
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.8e-10 70.9 148 29.7
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 3.6e-10 70.5 187 26.7
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 3.6e-10 70.5 197 31.0
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 3.6e-10 70.5 251 27.1
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 6.2e-10 69.7 166 28.9
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 6.2e-10 69.7 128 35.2
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.1e-09 68.9 132 31.8
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 1.1e-09 68.9 179 29.6
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 1.1e-09 68.9 141 28.4
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.1e-09 68.9 153 28.8
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 1.4e-09 68.6 150 32.0
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.4e-09 68.6 153 28.8
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 4.0e-09 67.0 155 31.6
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 5.2e-09 66.6 150 29.3
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 5.2e-09 66.6 170 31.2
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 6.8e-09 66.2 104 36.5
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 6.8e-09 66.2 137 28.5
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 6.8e-09 66.2 138 31.9
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.2e-08 65.5 138 31.9
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.2e-08 65.5 136 29.4
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.5e-08 65.1 108 37.0
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 1.5e-08 65.1 152 29.6
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 2.0e-08 64.7 171 29.2
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 3.4e-08 63.9 146 29.5
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 4.4e-08 63.5 157 26.8
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 5.8e-08 63.2 208 28.4
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 7.6e-08 62.8 234 26.1
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 9.9e-08 62.4 107 39.3
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 1.3e-07 62.0 104 29.8
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 1.3e-07 62.0 112 33.9
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 1.7e-07 61.6 93 36.6
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 2.2e-07 61.2 152 28.9
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 2.9e-07 60.8 227 27.8
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.9e-07 60.8 256 26.6
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.9e-07 60.8 135 31.1
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 3.8e-07 60.5 132 30.3
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 4.9e-07 60.1 91 34.1
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 4.9e-07 60.1 141 29.8
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 4.9e-07 60.1 109 31.2
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 8.4e-07 59.3 190 26.3
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 1.4e-06 58.5 113 31.9
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 4.2e-06 57.0 163 28.8
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.4e-06 56.6 142 26.8
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 7.1e-06 56.2 117 27.4


User provided reference genes

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