Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.4e-237 825.1 416 100.0
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 5.0e-142 508.4 339 71.4
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 5.6e-133 478.4 336 69.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 7.3e-133 478.0 322 70.8
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.1e-132 476.5 336 68.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 4.7e-132 475.3 336 68.8
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 2.3e-131 473.0 339 69.9
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.1e-131 472.6 336 69.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 4.0e-131 472.2 339 67.8
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 5.2e-131 471.9 339 68.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.4e-130 469.2 335 68.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.4e-130 469.2 337 67.7
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.7e-129 465.7 361 64.8
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.9e-128 463.4 369 63.1
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 3.2e-128 462.6 332 66.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 5.4e-128 461.8 362 63.3
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 7.1e-128 461.5 378 62.4
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.6e-127 460.3 332 66.6
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.1e-127 459.9 332 68.4
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 2.7e-127 459.5 339 66.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.7e-127 459.5 336 65.5
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.7e-127 459.5 359 63.5
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 2.7e-127 459.5 395 60.3
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 3.5e-127 459.1 329 68.7
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 4.6e-127 458.8 385 60.0
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 6.0e-127 458.4 364 64.0
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.0e-127 458.4 329 68.1
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 7.8e-127 458.0 385 60.3
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.0e-126 457.6 346 65.6
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.0e-126 457.6 326 67.8
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.0e-126 457.6 336 65.8
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.3e-126 457.2 328 67.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.7e-126 456.8 332 67.2
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.3e-126 456.4 328 66.8
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.3e-126 456.4 328 66.8
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 2.3e-126 456.4 337 66.2
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 3.0e-126 456.1 332 66.3
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 3.0e-126 456.1 371 61.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.0e-126 456.1 328 67.1
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.9e-126 455.7 336 65.8
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.1e-126 455.3 332 66.0
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.1e-126 455.3 332 66.0
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 6.6e-126 454.9 327 66.4
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 8.6e-126 454.5 336 65.5
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.5e-125 453.8 332 66.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.5e-125 453.8 360 62.8
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.5e-125 453.8 333 66.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.5e-125 453.0 336 65.5
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.5e-125 453.0 333 65.5
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 3.3e-125 452.6 328 66.8
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.3e-125 452.6 333 66.1
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.3e-125 452.6 360 62.5
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.3e-125 452.2 328 66.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 7.3e-125 451.4 348 62.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 9.5e-125 451.1 328 65.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 9.5e-125 451.1 340 64.7
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.2e-124 450.7 393 59.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.2e-124 450.7 387 59.4
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.2e-124 450.7 366 62.6
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.6e-124 450.3 358 62.8
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.6e-124 450.3 337 65.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 2.1e-124 449.9 359 62.7
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.8e-124 449.5 346 64.7
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.8e-124 449.5 335 65.1
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.8e-124 449.5 395 59.0
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.8e-124 449.5 336 66.1
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 4.7e-124 448.7 353 62.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 6.2e-124 448.4 331 66.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 6.2e-124 448.4 342 64.3
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.2e-124 448.4 323 66.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 6.2e-124 448.4 327 66.1
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 6.2e-124 448.4 327 66.1
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 8.1e-124 448.0 323 66.9
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.1e-124 448.0 323 66.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.1e-124 448.0 323 66.9
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.1e-123 447.6 329 66.6
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.4e-123 447.2 331 65.6
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.8e-123 446.8 332 65.1
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.8e-123 446.8 343 64.1
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.3e-123 446.4 344 64.0
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 5.2e-123 445.3 387 59.2
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.2e-123 445.3 346 62.1
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 8.9e-123 444.5 367 62.7
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.2e-122 444.1 336 65.5
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.2e-122 444.1 387 58.9
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.6e-122 443.0 366 61.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.6e-122 443.0 330 65.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 7.6e-122 441.4 287 77.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 4.9e-121 438.7 350 64.3
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 6.4e-121 438.3 332 64.2
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.1e-120 437.6 333 64.6
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 3.2e-120 436.0 399 56.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 5.4e-120 435.3 327 64.8
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.2e-119 434.1 327 65.4
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 7.8e-119 431.4 338 65.1
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.5e-117 427.2 361 61.5
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.5e-117 427.2 344 61.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 3.6e-116 422.5 380 57.6
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.4e-115 419.9 296 69.9
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.4e-115 419.9 380 56.6
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 3.1e-115 419.5 328 63.7
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.6e-114 416.4 388 57.7
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.3e-113 414.1 300 68.7
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 7.1e-112 408.3 373 57.4
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 4.6e-111 405.6 317 64.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.3e-108 397.5 353 56.9
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 3.4e-106 389.4 283 68.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.5e-101 374.0 331 58.0
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.4e-91 340.9 250 66.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.3e-89 334.3 324 54.3
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.9e-85 320.5 294 57.1
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 5.3e-83 312.4 300 54.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.3e-81 307.8 219 68.9
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 4.8e-76 289.3 318 49.1
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.7e-74 282.0 195 73.3
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 2.4e-67 260.4 291 48.5
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.9e-57 226.9 203 61.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.5e-45 188.0 128 64.8
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.8e-38 162.2 170 48.8
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.9e-34 149.4 103 70.9
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.5e-32 142.1 120 61.7
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 5.2e-30 136.3 113 60.2
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.5e-21 108.2 134 46.3
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.6e-18 98.2 184 35.3
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.4e-14 85.1 106 46.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.6e-10 70.1 54 53.7
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.0e-09 68.9 58 55.2


User provided reference genes

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