Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 9.8e-107 390.2 203 100.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.6e-16 90.5 122 41.8
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.6e-16 90.5 176 33.5
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.0e-15 87.8 142 37.3
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.4e-15 87.4 142 38.0
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 3.0e-15 86.3 142 38.0
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 4.3e-14 82.4 168 35.7
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 7.4e-14 81.6 161 35.4
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 9.7e-14 81.3 179 33.5
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 1.3e-13 80.9 130 38.5
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.7e-13 80.5 161 34.8
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 2.2e-13 80.1 179 33.0
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 3.7e-13 79.3 126 38.9
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 3.7e-13 79.3 156 35.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 3.7e-13 79.3 161 34.2
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 4.8e-13 79.0 154 36.4
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 4.8e-13 79.0 161 35.4
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.8e-13 79.0 161 34.8
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 6.3e-13 78.6 123 39.0
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.2e-13 78.2 161 34.2
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 8.2e-13 78.2 126 38.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 1.1e-12 77.8 145 35.9
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.8e-12 77.0 151 35.1
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 2.4e-12 76.6 161 33.5
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.4e-12 76.6 161 33.5
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 2.4e-12 76.6 144 36.1
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 2.4e-12 76.6 128 38.3
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 3.1e-12 76.3 154 35.7
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 3.1e-12 76.3 161 34.8
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 3.1e-12 76.3 161 32.9
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 4.1e-12 75.9 160 33.8
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 4.1e-12 75.9 161 34.2
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 5.3e-12 75.5 175 32.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 5.3e-12 75.5 130 37.7
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 5.3e-12 75.5 176 32.4
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 5.3e-12 75.5 161 33.5
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 5.3e-12 75.5 161 31.1
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 6.9e-12 75.1 158 33.5
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 6.9e-12 75.1 158 34.8
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 6.9e-12 75.1 154 35.7
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 6.9e-12 75.1 126 37.3
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 6.9e-12 75.1 144 36.1
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 6.9e-12 75.1 125 37.6
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 9.1e-12 74.7 161 32.3
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.1e-12 74.7 126 37.3
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 1.2e-11 74.3 161 31.7
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.5e-11 73.9 161 33.5
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.5e-11 73.9 80 48.8
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.5e-11 73.9 156 35.3
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 2.0e-11 73.6 126 36.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.0e-11 73.6 180 31.7
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 2.6e-11 73.2 126 34.9
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 2.6e-11 73.2 128 36.7
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 3.4e-11 72.8 166 34.9
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 3.4e-11 72.8 179 31.3
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 3.4e-11 72.8 156 34.6
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 4.5e-11 72.4 120 38.3
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 4.5e-11 72.4 130 36.9
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 4.5e-11 72.4 130 36.9
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 4.5e-11 72.4 121 38.8
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 5.9e-11 72.0 126 34.1
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 5.9e-11 72.0 161 31.7
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 5.9e-11 72.0 172 32.0
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 7.7e-11 71.6 154 35.1
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 7.7e-11 71.6 161 30.4
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 7.7e-11 71.6 161 30.4
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 7.7e-11 71.6 126 35.7
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 7.7e-11 71.6 161 32.9
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 7.7e-11 71.6 128 35.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 7.7e-11 71.6 155 33.5
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.0e-10 71.2 121 38.8
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.3e-10 70.9 151 35.8
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.3e-10 70.9 154 33.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 1.7e-10 70.5 143 32.2
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 1.7e-10 70.5 126 38.1
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.7e-10 70.5 158 33.5
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.2e-10 70.1 161 29.8
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 2.9e-10 69.7 83 44.6
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.8e-10 69.3 180 31.7
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 3.8e-10 69.3 148 33.8
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 5.0e-10 68.9 90 41.1
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.0e-10 68.9 154 33.1
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 6.5e-10 68.6 95 36.8
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 6.5e-10 68.6 151 33.8
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 8.5e-10 68.2 116 37.1
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 1.4e-09 67.4 144 33.3
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.4e-09 67.4 60 46.7
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.4e-09 67.4 90 38.9
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.9e-09 67.0 90 41.1
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.9e-09 67.0 144 34.0
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.9e-09 67.0 144 33.3
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.9e-09 67.0 161 29.2
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.9e-09 67.0 93 39.8
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.5e-09 66.6 144 33.3
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.5e-09 66.6 173 31.2
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.5e-09 66.6 148 33.1
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.2e-09 66.2 72 44.4
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.2e-09 66.2 155 29.0
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 4.2e-09 65.9 88 40.9
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 7.2e-09 65.1 55 50.9
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 7.2e-09 65.1 90 41.1
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 9.4e-09 64.7 55 52.7
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.6e-08 63.9 119 35.3
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.6e-08 63.9 60 46.7
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 3.6e-08 62.8 70 40.0
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 4.7e-08 62.4 90 36.7
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.1e-08 62.0 119 34.5
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 7.9e-08 61.6 88 37.5
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.3e-07 60.1 91 34.1
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.0e-07 59.7 55 47.3
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.0e-07 59.7 55 47.3
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 9.7e-06 54.7 53 43.4


User provided reference genes

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