Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0032s0063 Marchantia polymorpha HOM05D008826 ORTHO05D011306 1.2e-144 516.5 266 100.0
Mapoly0010s0171 Marchantia polymorpha HOM05D008826 ORTHO05D011306 2.5e-25 120.2 214 36.4
Mapoly0067s0077 Marchantia polymorpha HOM05D008826 ORTHO05D011306 6.7e-15 85.5 80 45.0
AagrBONN_evm.TU.Sc2ySwM_368.1278 Anthoceros agrestis HOM05D008826 ORTHO05D011306 1.4e-12 77.8 120 35.8
AagrBONN_evm.TU.Sc2ySwM_368.1325 Anthoceros agrestis HOM05D008826 ORTHO05D011306 5.3e-12 75.9 103 37.9
Mapoly0029s0140 Marchantia polymorpha HOM05D008826 ORTHO05D011306 1.6e-11 74.3 117 37.6
Mapoly0027s0068 Marchantia polymorpha HOM05D008826 ORTHO05D254469 8.5e-10 68.6 178 32.6
AagrBONN_evm.TU.Sc2ySwM_344.4738 Anthoceros agrestis HOM05D008826 ORTHO05D011306 3.2e-09 66.6 61 44.3
AagrBONN_evm.TU.Sc2ySwM_368.1318 Anthoceros agrestis HOM05D008826 ORTHO05D011306 5.5e-09 65.9 75 38.7
AagrBONN_evm.TU.Sc2ySwM_368.1319 Anthoceros agrestis HOM05D008826 ORTHO05D011306 5.5e-09 65.9 101 39.6
AagrBONN_evm.TU.Sc2ySwM_228.4060 Anthoceros agrestis HOM05D060664 ORTHO05D011306 2.1e-08 63.9 57 42.1
AagrBONN_evm.TU.Sc2ySwM_369.373 Anthoceros agrestis HOM05D008826 ORTHO05D011306 2.7e-08 63.5 51 47.1
AagrBONN_evm.TU.Sc2ySwM_368.1332 Anthoceros agrestis HOM05D008826 ORTHO05D011306 3.6e-08 63.2 129 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1312 Anthoceros agrestis HOM05D008826 ORTHO05D011306 6.1e-08 62.4 146 29.5
AagrBONN_evm.TU.Sc2ySwM_362.1127 Anthoceros agrestis HOM05D060664 ORTHO05D011306 2.3e-07 60.5 132 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4730 Anthoceros agrestis HOM05D008826 ORTHO05D011306 4.0e-07 59.7 118 33.1
AL3G16990 Arabidopsis lyrata HOM05D001407 ORTHO05D001314 4.0e-07 59.7 80 36.2
BcaC05g30052 Brassica carinata HOM05D001407 ORTHO05D001314 4.0e-07 59.7 93 33.3
Rhsim04G0206900 Rhododendron simsii HOM05D001407 ORTHO05D001314 6.7e-07 58.9 72 36.1
MSTRG.28009 Avicennia marina HOM05D001407 ORTHO05D001314 8.8e-07 58.5 72 36.1
Lj4g0020354 Lotus japonicus HOM05D001407 ORTHO05D001314 8.8e-07 58.5 69 37.7
MCO08G056 Micromonas commoda HOM05D008826 ORTHO05D011306 8.8e-07 58.5 79 31.6
Psat4g031640 Pisum sativum HOM05D001407 ORTHO05D001314 8.8e-07 58.5 69 37.7
AT3G06140 Arabidopsis thaliana HOM05D001407 ORTHO05D001314 1.2e-06 58.2 80 35.0
Glyma.13G208500 Glycine max HOM05D001407 ORTHO05D001314 1.2e-06 58.2 69 36.2
arahy.Tifrunner.gnm1.ann1.53PAXP Arachis hypogaea HOM05D001407 ORTHO05D001314 1.5e-06 57.8 69 36.2
arahy.Tifrunner.gnm1.ann1.67YB7U Arachis hypogaea HOM05D001407 ORTHO05D001314 1.5e-06 57.8 69 36.2
EL10Ac3g06362 Beta vulgaris HOM05D001407 ORTHO05D001314 1.5e-06 57.8 66 36.4
Carub.0003s0557 Capsella rubella HOM05D001407 ORTHO05D001314 1.5e-06 57.8 80 35.0
Thhalv10021004m.g Eutrema salsugineum HOM05D001407 ORTHO05D001314 1.5e-06 57.8 80 35.0
Medtr4g117250 Medicago truncatula HOM05D001407 ORTHO05D001314 1.5e-06 57.8 69 37.7
Atru.chr4.2567 Acer truncatum HOM05D001407 ORTHO05D001314 2.0e-06 57.4 69 37.7
CANSAT78G2116 Cannabis sativa HOM05D001407 ORTHO05D001314 2.0e-06 57.4 55 41.8
AagrBONN_evm.TU.Sc2ySwM_344.4726 Anthoceros agrestis HOM05D008826 ORTHO05D011306 2.6e-06 57.0 56 37.5
Ciclev10005143m.g Citrus clementina HOM05D001407 ORTHO05D001314 2.6e-06 57.0 69 39.1
Glyma.15G104300 Glycine max HOM05D001407 ORTHO05D001314 2.6e-06 57.0 69 34.8
ClCG05G005430 Citrullus lanatus HOM05D001407 ORTHO05D001314 3.3e-06 56.6 69 36.2
Mapoly0038s0105 Marchantia polymorpha HOM05D008826 ORTHO05D253781 3.3e-06 56.6 159 28.3
Sp3g05090 Schrenkiella parvula HOM05D001407 ORTHO05D001314 3.3e-06 56.6 80 35.0
Ah.13g074220 Amaranthus hybridus HOM05D001407 ORTHO05D001314 4.4e-06 56.2 66 36.4
Oeu043375.1 Olea europaea HOM05D001407 ORTHO05D001314 4.4e-06 56.2 72 34.7
Sabra10G0010900 Salix brachista HOM05D001407 ORTHO05D001314 4.4e-06 56.2 69 36.2
VMungo1215G0170 Vigna mungo HOM05D001407 ORTHO05D001314 4.4e-06 56.2 67 35.8
Atru.chr8.1874 Acer truncatum HOM05D001407 ORTHO05D001314 5.7e-06 55.8 69 36.2
Aqoxy2G03272 Aquilegia oxysepala HOM05D001407 ORTHO05D001314 5.7e-06 55.8 75 36.0
A05p41860 Brassica napus HOM05D001407 ORTHO05D001314 5.7e-06 55.8 80 33.8
BraA05t22905Z Brassica rapa HOM05D001407 ORTHO05D001314 5.7e-06 55.8 80 33.8
CSS0010679 Camellia sinensis var. sinensis HOM05D001407 ORTHO05D001314 5.7e-06 55.8 70 35.7
CSS0014847 Camellia sinensis var. sinensis HOM05D001407 ORTHO05D001314 5.7e-06 55.8 69 36.2
FAN07G0074 Fragaria x ananassa HOM05D001407 ORTHO05D001314 5.7e-06 55.8 52 44.2
Gohir.A09G054500 Gossypium hirsutum HOM05D001407 ORTHO05D001314 7.5e-06 55.5 66 36.4
Gorai.006G053800 Gossypium raimondii HOM05D001407 ORTHO05D001314 7.5e-06 55.5 66 36.4
MD13G1183800 Malus domestica HOM05D001407 ORTHO05D001314 7.5e-06 55.5 69 34.8
Potri.010G030600 Populus trichocarpa HOM05D001407 ORTHO05D001314 7.5e-06 55.5 69 36.2
TWI73G0010 Tripterygium wilfordii HOM05D001407 ORTHO05D001314 7.5e-06 55.5 66 37.9
AagrBONN_evm.TU.Sc2ySwM_362.1655 Anthoceros agrestis HOM05D008826 ORTHO05D011306 9.7e-06 55.1 54 40.7
COL.COLO4_21649 Corchorus olitorius HOM05D001407 ORTHO05D001314 9.7e-06 55.1 66 36.4
FAN02G3851 Fragaria x ananassa HOM05D001407 ORTHO05D001314 9.7e-06 55.1 66 34.8
FAN09G4561 Fragaria x ananassa HOM05D001407 ORTHO05D001314 9.7e-06 55.1 66 34.8
FAN14G2489 Fragaria x ananassa HOM05D001407 ORTHO05D001314 9.7e-06 55.1 66 34.8
Glyma.12G038600 Glycine max HOM05D000240 ORTHO05D001153 9.7e-06 55.1 183 24.6
Mapoly0178s0025 Marchantia polymorpha HOM05D008826 ORTHO05D011306 9.7e-06 55.1 300 24.0
Nn1g02167 Nelumbo nucifera HOM05D001407 ORTHO05D001314 9.7e-06 55.1 55 38.2


User provided reference genes

Program Settings