Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 0.0e+00 1199.1 664 100.0
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 8.5e-43 179.5 599 32.9
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 8.5e-43 179.5 599 32.9
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 1.9e-42 178.3 653 33.1
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 8.6e-35 152.9 624 29.8
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.5e-31 142.1 624 29.3
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.4e-31 141.0 602 29.9
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 5.7e-31 140.2 521 32.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 7.5e-31 139.8 692 28.9
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 9.8e-31 139.4 625 28.3
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-30 139.0 619 28.9
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.7e-30 138.7 663 30.2
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 1.4e-29 135.6 580 30.3
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 2.4e-29 134.8 646 29.1
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.4e-29 134.8 674 28.2
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.4e-29 134.8 649 28.8
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 5.4e-29 133.7 598 29.3
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 9.2e-29 132.9 672 29.2
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.6e-28 130.6 582 30.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 4.6e-28 130.6 587 30.7
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 4.6e-28 130.6 606 30.0
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.0e-27 129.4 598 29.8
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.3e-27 129.0 622 29.4
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 1.7e-27 128.6 514 31.9
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 5.0e-27 127.1 586 29.2
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 8.6e-27 126.3 634 29.5
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.5e-26 125.6 581 29.8
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 3.3e-26 124.4 640 30.0
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 3.3e-26 124.4 606 31.0
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 5.6e-26 123.6 667 29.2
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 9.5e-26 122.9 609 31.7
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.2e-25 122.5 611 28.5
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.6e-25 122.1 693 28.3
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.7e-25 120.6 700 27.3
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 8.0e-25 119.8 631 28.7
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.1e-24 119.4 673 27.8
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 2.3e-24 118.2 597 29.5
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 3.1e-24 117.9 674 29.2
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 3.1e-24 117.9 645 29.3
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 4.0e-24 117.5 650 29.5
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 6.8e-24 116.7 582 30.2
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 2.6e-23 114.8 490 29.4
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 4.4e-23 114.0 585 29.7
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 5.8e-23 113.6 515 29.7
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 7.5e-23 113.2 649 28.8
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.3e-22 112.5 614 29.3
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.7e-22 112.1 602 29.6
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 6.4e-22 110.2 586 28.3
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 8.3e-22 109.8 559 27.4
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 8.3e-22 109.8 637 27.6
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.4e-21 109.0 541 29.9
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.4e-21 109.0 589 27.8
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 4.1e-21 107.5 576 27.8
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 5.4e-21 107.1 643 27.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.6e-20 105.5 621 27.5
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.6e-20 105.5 618 29.6
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 2.0e-20 105.1 649 29.0
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 2.7e-20 104.8 611 30.1
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 6.0e-20 103.6 629 27.8
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.0e-19 101.3 644 28.6
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.9e-19 100.9 630 29.0
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 6.6e-19 100.1 636 27.7
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.1e-18 99.4 528 29.4
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.1e-18 99.4 674 27.4
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.5e-18 99.0 555 29.7
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.9e-18 98.6 636 27.7
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 2.5e-18 98.2 634 26.2
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.3e-18 97.8 600 28.8
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 1.2e-17 95.9 667 26.7
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.8e-17 94.7 644 28.4
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 4.7e-17 94.0 615 25.7
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 1.4e-16 92.4 710 24.9
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.1e-16 91.3 715 25.9
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 5.2e-16 90.5 676 26.2
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 5.2e-16 90.5 702 26.8
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 1.2e-15 89.4 446 30.0
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.5e-15 89.0 609 25.3
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.3e-14 85.9 628 26.3
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.9e-14 84.7 640 25.3
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 4.9e-14 84.0 546 29.3
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 4.9e-14 84.0 519 29.3
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.4e-13 82.4 562 28.6
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 3.2e-13 81.3 284 32.4
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.6e-12 79.0 582 26.5
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.6e-12 79.0 653 26.2
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.7e-12 78.2 580 28.6
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.0e-12 77.0 596 25.7
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.0e-11 76.3 603 26.7
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.3e-11 75.9 582 28.7
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.3e-11 75.9 671 24.4
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.3e-11 75.9 408 27.2
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 1.7e-11 75.5 579 29.0
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 1.7e-11 75.5 579 29.0
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 3.9e-11 74.3 600 27.8
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 8.6e-11 73.2 557 29.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 8.6e-11 73.2 550 24.9
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.1e-10 72.8 565 27.4
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 8.1e-09 66.6 389 27.5
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 3.1e-08 64.7 462 26.4
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 3.1e-08 64.7 593 25.8
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 3.1e-08 64.7 593 25.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.2e-07 62.8 431 26.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 2.2e-06 58.5 613 24.6
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 2.9e-06 58.2 638 23.0
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.8e-06 57.8 400 27.2


User provided reference genes

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