Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 3.0e-93 345.1 170 100.0
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 8.0e-54 214.2 166 60.2
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 1.4e-53 213.4 170 60.0
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 3.4e-52 208.8 170 58.8
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 3.4e-52 208.8 170 58.2
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 4.4e-52 208.4 170 58.8
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.3e-51 206.8 170 58.8
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 2.2e-51 206.1 170 57.1
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 2.9e-51 205.7 170 58.2
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 2.9e-51 205.7 170 58.8
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 3.7e-51 205.3 163 60.1
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 4.9e-51 204.9 170 58.8
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 4.9e-51 204.9 170 59.4
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 6.4e-51 204.5 170 57.6
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 1.4e-50 203.4 170 56.5
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 1.4e-50 203.4 170 57.1
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 1.8e-50 203.0 170 57.1
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 1.8e-50 203.0 170 56.5
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 1.8e-50 203.0 170 57.1
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 2.4e-50 202.6 170 57.6
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 4.1e-50 201.8 170 57.6
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 5.4e-50 201.4 170 57.1
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 5.4e-50 201.4 164 59.8
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 7.0e-50 201.1 170 57.6
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 7.0e-50 201.1 170 55.9
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 9.2e-50 200.7 163 57.7
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 9.2e-50 200.7 170 57.6
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 1.2e-49 200.3 170 56.5
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 1.2e-49 200.3 164 56.7
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 1.6e-49 199.9 165 59.4
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 2.0e-49 199.5 166 57.8
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 2.7e-49 199.1 170 56.5
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 3.5e-49 198.7 170 56.5
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 4.6e-49 198.4 170 55.3
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 5.9e-49 198.0 167 55.1
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 7.8e-49 197.6 164 56.1
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 7.8e-49 197.6 164 57.3
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 1.3e-48 196.8 170 55.3
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 2.3e-48 196.1 170 56.5
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 3.9e-48 195.3 159 58.5
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 5.0e-48 194.9 170 56.5
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 5.0e-48 194.9 164 54.9
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 6.6e-48 194.5 165 57.0
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 8.6e-48 194.1 159 58.5
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 1.1e-47 193.7 163 56.4
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 1.5e-47 193.4 170 54.7
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 1.5e-47 193.4 170 54.7
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 3.3e-47 192.2 163 56.4
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.8e-46 189.1 164 55.5
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 2.8e-46 189.1 158 56.3
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 4.7e-46 188.3 170 54.7
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 6.2e-46 188.0 164 53.0
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 8.0e-46 187.6 173 53.8
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 3.1e-45 185.7 188 48.9
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 6.8e-45 184.5 168 54.8
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 3.4e-44 182.2 162 56.2
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 5.8e-44 181.4 170 51.8
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.7e-43 179.9 163 54.0
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 2.2e-43 179.5 168 53.6
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 1.0e-40 170.6 151 53.6
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 2.5e-39 166.0 151 54.3
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 2.1e-38 162.9 139 57.6
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 1.1e-37 160.6 155 51.6
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 1.1e-37 160.6 170 49.4
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.1e-37 160.6 169 49.1
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 6.8e-37 157.9 155 51.0
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 6.8e-37 157.9 232 39.2
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 8.9e-37 157.5 153 51.6
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 8.9e-37 157.5 139 54.7
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 2.6e-36 156.0 139 51.8
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 7.5e-36 154.5 166 44.6
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 9.8e-36 154.1 133 56.4
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 1.7e-35 153.3 164 47.0
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 4.9e-35 151.8 166 43.4
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 9.2e-34 147.5 168 45.8
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 1.7e-32 143.3 125 56.0
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 4.3e-31 138.7 116 58.6
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.9e-26 123.2 113 53.1
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 3.2e-26 122.5 162 43.8
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 4.1e-26 122.1 158 36.1
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 7.1e-26 121.3 114 50.9
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 1.9e-23 113.2 158 41.1
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 2.8e-22 109.4 75 65.3
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 3.6e-22 109.0 163 39.3
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 6.9e-21 104.8 91 54.9
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.2e-17 94.0 138 39.1
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 1.2e-17 94.0 96 51.0
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 4.3e-15 85.5 114 40.4
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.6e-14 83.6 58 67.2
Atru.chr5.3316 Acer truncatum HOM05D000282 ORTHO05D000272 4.0e-13 79.0 67 55.2
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 5.3e-13 78.6 57 59.6
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 9.0e-13 77.8 52 65.4
Actinidia18005 Actinidia chinensis HOM05D007618 ORTHO05D009606 7.6e-12 74.7 62 51.6
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 7.6e-12 74.7 102 42.2
Atru.chr8.2195 Acer truncatum HOM05D000282 ORTHO05D009606 1.7e-11 73.6 65 50.8
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.9e-10 70.1 64 53.1
arahy.Tifrunner.gnm1.ann1.UUK80H Arachis hypogaea HOM05D002157 ORTHO05D002197 9.3e-10 67.8 154 29.2
CDE05G1760 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 6.0e-09 65.1 62 45.2
Atru.chr9.1689 Acer truncatum HOM05D000282 ORTHO05D009606 1.8e-08 63.5 56 51.8
Eucgr.A02309 Eucalyptus grandis HOM05D002157 ORTHO05D002197 2.3e-08 63.2 154 27.9
PGR004G1005 Punica granatum HOM05D002157 ORTHO05D002197 2.5e-07 59.7 154 27.9
Atru.chr4.2937 Acer truncatum HOM05D000282 ORTHO05D000272 4.3e-07 58.9 48 54.2
Sabra16G0048400 Salix brachista HOM05D002157 ORTHO05D002197 4.3e-07 58.9 154 26.6
SEGI_18644 Sequoiadendron giganteum HOM05D002157 ORTHO05D002197 7.4e-07 58.2 153 26.8
unitig_26.g9056 Utricularia gibba HOM05D002157 ORTHO05D002197 1.6e-06 57.0 154 27.3
Cfa022547 Carpinus fangiana HOM05D007618 ORTHO05D125993 4.8e-06 55.5 147 28.6
PSO384G0981 Papaver somniferum HOM05D002157 ORTHO05D002197 4.8e-06 55.5 163 27.0


User provided reference genes

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