Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0031s0147 Marchantia polymorpha HOM05D034204 ORTHO05D005062 9.7e-96 353.6 195 100.0
Mapoly0050s0087 Marchantia polymorpha HOM05D034204 ORTHO05D005062 8.2e-87 323.9 196 93.4
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 2.4e-09 66.6 144 39.6
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 3.1e-09 66.2 139 38.1
AagrBONN_evm.TU.Sc2ySwM_228.3972 Anthoceros agrestis HOM05D004577 ORTHO05D005062 4.0e-09 65.9 90 57.8
THA.LOC104826365 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 9.0e-09 64.7 94 57.4
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 1.5e-08 63.9 144 38.9
CARHR045970 Cardamine hirsuta HOM05D004577 ORTHO05D005062 2.0e-08 63.5 100 55.0
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 2.0e-08 63.5 128 41.4
MBI15_g38535_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 2.0e-08 63.5 79 62.0
CSS0050514 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.6e-08 63.2 107 49.5
Solyc04g051850.3 Solanum lycopersicum HOM05D004577 ORTHO05D005062 3.4e-08 62.8 103 52.4
Gohir.D09G118900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 4.5e-08 62.4 92 47.8
Sopen04g023180 Solanum pennellii HOM05D004577 ORTHO05D005062 4.5e-08 62.4 103 52.4
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 5.8e-08 62.0 95 46.3
Sc22g0002120 Simmondsia chinensis HOM05D004577 ORTHO05D005062 5.8e-08 62.0 79 62.0
CSS0030856 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 7.6e-08 61.6 153 42.5
MSTRG.14503 Avicennia marina HOM05D004577 ORTHO05D005062 1.0e-07 61.2 104 51.0
PGSC0003DMG400016552 Solanum tuberosum HOM05D004577 ORTHO05D005062 1.0e-07 61.2 103 51.5
TAR627G0729 Trochodendron aralioides HOM05D004577 ORTHO05D005062 1.0e-07 61.2 131 42.7
Thhalv10008915m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 1.3e-07 60.8 86 59.3
PSO541G2111 Papaver somniferum HOM05D004577 ORTHO05D005062 1.3e-07 60.8 90 56.7
PSO675G7851 Papaver somniferum HOM05D004577 ORTHO05D005062 1.3e-07 60.8 90 56.7
Peaxi162Scf00359g00123 Petunia axillaris HOM05D004577 ORTHO05D005062 1.3e-07 60.8 78 62.8
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 1.3e-07 60.8 102 52.0
HPP92_020499 Vanilla planifolia HOM05D004577 ORTHO05D005062 1.3e-07 60.8 87 63.2
MSTRG.13031 Avicennia marina HOM05D004577 ORTHO05D005062 1.7e-07 60.5 97 51.5
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 1.7e-07 60.5 96 50.0
A05p12690 Brassica napus HOM05D004577 ORTHO05D005062 1.7e-07 60.5 87 59.8
C04p16620 Brassica napus HOM05D004577 ORTHO05D005062 1.7e-07 60.5 87 59.8
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 1.7e-07 60.5 87 59.8
BraA05t20207Z Brassica rapa HOM05D004577 ORTHO05D005062 1.7e-07 60.5 87 59.8
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 1.7e-07 60.5 138 44.2
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 1.7e-07 60.5 99 44.4
Thhalv10011850m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 1.7e-07 60.5 108 50.0
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 2.2e-07 60.1 144 40.3
TAR629G1725 Trochodendron aralioides HOM05D004577 ORTHO05D005062 2.2e-07 60.1 79 59.5
BcaB02g10507 Brassica carinata HOM05D004577 ORTHO05D005062 2.9e-07 59.7 87 59.8
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 2.9e-07 59.7 86 52.3
Dinv40884 Davidia involucrata HOM05D002691 ORTHO05D003304 3.8e-07 59.3 79 64.6
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 4.9e-07 58.9 100 53.0
A08p24420 Brassica napus HOM05D004577 ORTHO05D005062 4.9e-07 58.9 86 53.5
BraA08t34397Z Brassica rapa HOM05D004577 ORTHO05D005062 4.9e-07 58.9 86 53.5
CDE01G0461 Ceratophyllum demersum HOM05D004577 ORTHO05D005062 4.9e-07 58.9 90 54.4
Pp3c1_35130 Physcomitrium patens HOM05D034204 ORTHO05D005062 4.9e-07 58.9 89 59.6
ATR0681G062 Amborella trichopoda HOM05D004577 ORTHO05D005062 6.5e-07 58.5 133 45.1
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 6.5e-07 58.5 90 52.2
Cc10_g02580 Coffea canephora HOM05D004577 ORTHO05D005062 6.5e-07 58.5 82 58.5
Gohir.A01G038700 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.5e-07 58.5 92 46.7
CSS0013049 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 8.4e-07 58.2 101 50.5
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 1.1e-06 57.8 80 55.0
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 1.1e-06 57.8 80 55.0
ECA240G1529 Erigeron canadensis HOM05D000491 ORTHO05D000359 1.1e-06 57.8 75 64.0
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 1.1e-06 57.8 80 60.0
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 1.1e-06 57.8 81 50.6
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 1.4e-06 57.4 100 52.0
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 1.4e-06 57.4 100 52.0
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 1.4e-06 57.4 102 46.1
unitig_578.g16418 Utricularia gibba HOM05D004577 ORTHO05D005062 1.4e-06 57.4 80 58.8
AL1G44500 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 1.9e-06 57.0 85 58.8
HanXRQChr13g0408461 Helianthus annuus HOM05D004577 ORTHO05D005062 1.9e-06 57.0 78 61.5
Nn1g08321 Nelumbo nucifera HOM05D004577 ORTHO05D005062 2.5e-06 56.6 79 57.0
AT1G30475 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 4.2e-06 55.8 85 58.8
HanXRQChr03g0080381 Helianthus annuus HOM05D004577 ORTHO05D005062 4.2e-06 55.8 75 62.7
DCAR_015198 Daucus carota HOM05D004577 ORTHO05D005062 5.5e-06 55.5 114 46.5
Migut.M01633 Erythranthe guttata HOM05D004577 ORTHO05D005062 5.5e-06 55.5 83 56.6
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 5.5e-06 55.5 82 53.7
Sp1g41840 Schrenkiella parvula HOM05D004577 ORTHO05D005062 5.5e-06 55.5 87 58.6
EL10Ac2g03806 Beta vulgaris HOM05D004577 ORTHO05D005062 9.3e-06 54.7 84 58.3
Oeu021394.1 Olea europaea HOM05D004577 ORTHO05D005062 9.3e-06 54.7 83 54.2
QL08p002692 Quercus lobata HOM05D004577 ORTHO05D005062 9.3e-06 54.7 139 43.9
Solyc08g006050.2 Solanum lycopersicum HOM05D004577 ORTHO05D005062 9.3e-06 54.7 78 57.7


User provided reference genes

Program Settings