Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 0.0e+00 1319.3 755 100.0
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 4.4e-112 409.8 824 41.4
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.2e-58 231.5 751 29.3
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 2.8e-58 231.1 740 29.6
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.5e-56 225.3 742 29.4
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 4.5e-56 223.8 746 29.1
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 5.9e-56 223.4 734 29.6
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.0e-55 222.6 743 28.9
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.3e-55 222.2 743 28.9
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.4e-54 218.8 746 28.4
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 1.4e-54 218.8 742 29.2
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.4e-54 218.8 737 29.3
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 3.2e-54 217.6 765 28.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 5.5e-54 216.9 739 29.2
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 5.5e-54 216.9 749 31.2
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 9.4e-54 216.1 764 28.4
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.6e-53 214.2 753 30.4
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 3.6e-53 214.2 752 28.2
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 3.0e-52 211.1 753 28.0
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 3.9e-52 210.7 753 30.0
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 3.9e-52 210.7 747 28.1
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 6.7e-52 209.9 763 29.0
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 8.8e-52 209.5 751 27.8
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 8.8e-52 209.5 751 29.0
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 2.6e-51 208.0 745 29.7
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 3.3e-51 207.6 750 28.7
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.3e-51 207.6 761 28.6
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 4.4e-51 207.2 741 28.2
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 5.7e-51 206.8 743 28.7
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 7.4e-51 206.5 750 29.3
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 9.7e-51 206.1 739 27.2
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 9.7e-51 206.1 745 29.3
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.3e-50 205.7 746 28.7
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.8e-50 204.5 751 27.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 2.8e-50 204.5 760 27.6
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 3.7e-50 204.1 741 28.1
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.7e-50 204.1 751 29.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.8e-49 201.8 750 28.7
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 2.4e-49 201.4 744 28.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.2e-48 199.1 763 25.7
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.6e-48 198.0 750 27.5
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 4.5e-48 197.2 741 29.3
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.3e-47 195.7 737 28.9
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.7e-47 195.3 745 28.3
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.2e-47 194.9 753 29.2
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 5.0e-47 193.7 776 26.8
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.0e-47 193.7 741 29.0
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 6.5e-47 193.4 733 27.1
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.5e-46 191.4 764 27.1
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 4.2e-46 190.7 752 27.5
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.5e-46 190.3 747 26.6
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 5.5e-46 190.3 740 29.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 7.2e-46 189.9 782 27.1
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.6e-45 188.7 733 27.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 4.7e-45 187.2 718 27.7
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 8.0e-45 186.4 712 26.3
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.4e-44 185.7 773 27.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.4e-44 185.7 764 26.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.8e-44 185.3 738 28.6
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 3.9e-44 184.1 733 28.4
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.5e-43 182.2 784 27.8
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.6e-43 181.4 736 28.4
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 3.3e-43 181.0 752 28.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 7.4e-43 179.9 779 27.5
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 7.4e-43 179.9 784 27.3
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.7e-42 178.7 779 27.2
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.7e-42 178.7 784 27.2
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.7e-42 178.7 746 28.4
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 3.7e-42 177.6 741 27.4
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.8e-41 175.3 782 27.2
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 5.3e-41 173.7 747 26.1
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 7.0e-41 173.3 779 27.3
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 7.0e-41 173.3 631 28.1
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 2.6e-40 171.4 692 28.3
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.6e-40 171.4 725 28.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.6e-40 171.4 754 28.8
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 4.5e-40 170.6 520 30.0
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.9e-40 170.2 800 25.1
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.9e-40 170.2 768 24.9
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 7.7e-40 169.9 693 28.0
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.3e-39 169.1 509 29.3
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 8.5e-39 166.4 473 31.5
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 5.5e-38 163.7 755 26.0
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 7.2e-38 163.3 794 25.3
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.0e-36 157.9 529 28.5
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 6.7e-36 156.8 480 29.6
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 8.8e-36 156.4 757 25.0
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 7.5e-35 153.3 745 27.2
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 2.4e-33 148.3 720 25.6
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 9.1e-33 146.4 759 26.1
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.7e-32 144.8 694 24.8
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.0e-31 142.9 240 37.1
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.9e-30 138.7 769 26.1
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.2e-30 137.9 514 28.2
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.2e-28 130.6 195 39.5
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.5e-27 129.0 741 24.0
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 5.7e-27 127.1 739 25.7
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.2e-26 125.2 152 48.0
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 8.3e-26 123.2 153 45.8
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 5.4e-25 120.6 742 23.9
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 3.5e-24 117.9 144 45.1
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 3.5e-24 117.9 194 36.1
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 3.3e-22 111.3 596 26.7
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 3.1e-17 94.7 183 36.1
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.5e-16 91.3 311 27.7
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.7e-15 89.0 222 30.6
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.9e-14 85.5 616 24.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 2.5e-14 85.1 575 25.6
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.5e-14 85.1 92 44.6
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 7.3e-14 83.6 302 28.8
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 7.3e-14 83.6 373 27.6
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 7.3e-14 83.6 102 43.1
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.1e-13 82.0 597 22.1
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.0e-12 79.7 393 27.2
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.2e-11 76.3 853 22.4
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.2e-10 72.0 117 39.3
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.4e-10 70.5 119 37.8
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.7e-08 65.1 79 44.3
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.6e-08 64.3 77 46.8
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 6.0e-08 63.9 305 28.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 6.0e-08 63.9 48 70.8
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.3e-07 62.0 324 25.3


User provided reference genes

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