Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0031s0004 Marchantia polymorpha HOM05D015438 ORTHO05D018027 3.9e-171 604.7 315 100.0
Mapoly0066s0028 Marchantia polymorpha HOM05D015438 ORTHO05D018027 1.4e-91 340.5 233 73.0
Mapoly0050s0031 Marchantia polymorpha HOM05D015438 ORTHO05D018027 2.1e-87 326.6 233 70.8
Mapoly0066s0027 Marchantia polymorpha HOM05D015438 ORTHO05D018027 5.6e-85 318.5 277 61.7
Mapoly0021s0113 Marchantia polymorpha HOM05D015438 ORTHO05D018027 2.5e-48 196.8 220 49.1
Mapoly0015s0132 Marchantia polymorpha HOM05D015438 ORTHO05D018027 4.2e-16 89.7 94 48.9
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.7e-15 87.0 170 35.3
Mapoly0179s0008 Marchantia polymorpha HOM05D015438 ORTHO05D018027 2.7e-15 87.0 146 37.0
Mapoly0063s0068 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.2e-14 82.8 210 32.9
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 2.8e-12 77.0 254 27.2
Mapoly0003s0241 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.0e-11 72.4 249 26.9
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-10 71.6 234 27.8
Mapoly0138s0031 Marchantia polymorpha HOM05D002809 ORTHO05D010190 5.9e-10 69.3 231 25.1
Mapoly0006s0115 Marchantia polymorpha HOM05D002809 ORTHO05D010190 8.5e-09 65.5 257 28.4
Mapoly0085s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-08 65.1 101 35.6
TAR381G0769 Trochodendron aralioides HOM05D003005 ORTHO05D004939 1.9e-08 64.3 220 28.6
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 3.2e-08 63.5 222 27.0
Duzib251G0128 Durio zibethinus HOM05D002809 ORTHO05D004563 4.2e-08 63.2 131 35.9
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 5.5e-08 62.8 142 34.5
Mapoly0093s0087 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.2e-08 62.4 233 25.8
PGSC0003DMG400034305 Solanum tuberosum HOM05D002809 ORTHO05D004563 7.2e-08 62.4 212 29.7
Mapoly0004s0242 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.2e-07 61.6 130 33.8
CARHR171900 Cardamine hirsuta HOM05D003005 ORTHO05D004170 1.6e-07 61.2 147 32.7
A07p11920 Brassica napus HOM05D002809 ORTHO05D004563 2.1e-07 60.8 127 33.9
TAR636G3621 Trochodendron aralioides HOM05D003005 ORTHO05D004170 2.1e-07 60.8 146 30.8
Sc14g0009090 Simmondsia chinensis HOM05D002809 ORTHO05D004563 2.7e-07 60.5 131 34.4
Aa31LG10G15410 Aethionema arabicum HOM05D003005 ORTHO05D004170 3.6e-07 60.1 146 29.5
Duzib268G1054 Durio zibethinus HOM05D002809 ORTHO05D004563 4.7e-07 59.7 131 35.1
MSTRG.8011 Avicennia marina HOM05D002809 ORTHO05D004563 6.1e-07 59.3 132 34.1
Manes.12G010000 Manihot esculenta HOM05D002809 ORTHO05D004563 6.1e-07 59.3 132 32.6
Thecc.02G206300 Theobroma cacao HOM05D002809 ORTHO05D004563 6.1e-07 59.3 131 35.1
Aqoxy5G03341 Aquilegia oxysepala HOM05D002809 ORTHO05D004563 8.0e-07 58.9 131 32.8
COL.COLO4_20416 Corchorus olitorius HOM05D002809 ORTHO05D004563 8.0e-07 58.9 131 35.1
Duzib248G0261 Durio zibethinus HOM05D002809 ORTHO05D004563 8.0e-07 58.9 131 34.4
Eucgr.H04635 Eucalyptus grandis HOM05D002809 ORTHO05D004563 8.0e-07 58.9 134 33.6
vmacro16104 Vaccinium macrocarpon HOM05D002809 ORTHO05D004563 8.0e-07 58.9 131 32.8
Thhalv10005970m.g Eutrema salsugineum HOM05D003005 ORTHO05D004170 1.0e-06 58.5 155 31.0
HanXRQChr08g0207911 Helianthus annuus HOM05D002809 ORTHO05D004563 1.0e-06 58.5 230 26.5
Hund25470 Selenicereus undatus HOM05D002809 ORTHO05D004563 1.0e-06 58.5 130 33.8
CSS0014036 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 1.4e-06 58.2 131 34.4
Gohir.D01G146700 Gossypium hirsutum HOM05D002809 ORTHO05D004563 1.4e-06 58.2 131 34.4
Gorai.002G182600 Gossypium raimondii HOM05D002809 ORTHO05D004563 1.4e-06 58.2 131 34.4
QL03p052448 Quercus lobata HOM05D002809 ORTHO05D004563 1.4e-06 58.2 131 33.6
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 1.8e-06 57.8 132 34.1
Nitab4.5_0004914g0010 Nicotiana tabacum HOM05D002809 ORTHO05D004563 1.8e-06 57.8 131 33.6
Sopen12g034970 Solanum pennellii HOM05D002809 ORTHO05D004563 1.8e-06 57.8 270 26.3
Atru.chr11.2338 Acer truncatum HOM05D002809 ORTHO05D004563 2.3e-06 57.4 131 32.8
Actinidia09645 Actinidia chinensis HOM05D002809 ORTHO05D004563 2.3e-06 57.4 144 31.9
Actinidia20715 Actinidia chinensis HOM05D002809 ORTHO05D004563 2.3e-06 57.4 144 31.9
Aa31LG7G9860 Aethionema arabicum HOM05D002809 ORTHO05D004563 2.3e-06 57.4 152 29.6
ATR0561G142 Amborella trichopoda HOM05D002809 ORTHO05D004563 2.3e-06 57.4 131 32.8
Gohir.A01G154500 Gossypium hirsutum HOM05D002809 ORTHO05D004563 2.3e-06 57.4 131 34.4
Gorai.005G165900 Gossypium raimondii HOM05D002809 ORTHO05D004563 2.3e-06 57.4 133 35.3
Lalb_Chr07g0187081 Lupinus albus HOM05D002809 ORTHO05D004563 2.3e-06 57.4 170 30.0
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.3e-06 57.4 129 34.9
Nn4g22302 Nelumbo nucifera HOM05D002809 ORTHO05D004563 2.3e-06 57.4 130 33.8
Sp1g23570 Schrenkiella parvula HOM05D002809 ORTHO05D004563 2.3e-06 57.4 127 33.1
SEGI_08933 Sequoiadendron giganteum HOM05D002809 ORTHO05D004563 2.3e-06 57.4 131 35.1
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 2.3e-06 57.4 146 30.8
TAR371G1123 Trochodendron aralioides HOM05D002809 ORTHO05D004563 2.3e-06 57.4 132 32.6
ECA246G0607 Erigeron canadensis HOM05D002809 ORTHO05D004563 3.0e-06 57.0 301 23.6
Potri.001G057100 Populus trichocarpa HOM05D002809 ORTHO05D004563 3.0e-06 57.0 131 32.1
Actinidia20178 Actinidia chinensis HOM05D003005 ORTHO05D004170 4.0e-06 56.6 145 29.7
BcaC05g26549 Brassica carinata HOM05D002809 ORTHO05D004563 4.0e-06 56.6 126 33.3
C05p26040 Brassica napus HOM05D002809 ORTHO05D004563 4.0e-06 56.6 126 33.3
CSS0036768 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 4.0e-06 56.6 131 33.6
Carub.0001s2587 Capsella rubella HOM05D002809 ORTHO05D004563 4.0e-06 56.6 127 33.1
Ciclev10031436m.g Citrus clementina HOM05D002809 ORTHO05D004563 4.0e-06 56.6 145 32.4
Cc11_g17010 Coffea canephora HOM05D002809 ORTHO05D004563 4.0e-06 56.6 131 32.8
Haze_12431 Corylus avellana HOM05D002809 ORTHO05D004563 4.0e-06 56.6 131 32.8
Lj3P1070T8 Lonicera japonica HOM05D002809 ORTHO05D004563 4.0e-06 56.6 132 32.6
Potri.003G171300 Populus trichocarpa HOM05D002809 ORTHO05D004563 4.0e-06 56.6 131 32.8
SEGI_32653 Sequoiadendron giganteum HOM05D006415 ORTHO05D008549 4.0e-06 56.6 132 30.3
Zm00001eb143020 Zea mays HOM05D002809 ORTHO05D004563 4.0e-06 56.6 132 31.1
AL1G40740 Arabidopsis lyrata HOM05D002809 ORTHO05D004563 5.2e-06 56.2 127 33.1
AT1G27340 Arabidopsis thaliana HOM05D002809 ORTHO05D004563 5.2e-06 56.2 127 33.1
A09p38610 Brassica napus HOM05D002809 ORTHO05D004563 5.2e-06 56.2 126 34.1
Dinv17569 Davidia involucrata HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 32.8
Lalb_Chr23g0278141 Lupinus albus HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 30.5
Medtr3g085160 Medicago truncatula HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 32.8
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 5.2e-06 56.2 145 32.4
Oeu004454.1 Olea europaea HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 32.1
Peaxi162Scf00128g00136 Petunia axillaris HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 32.8
SalBow2G0967 Salvia bowleyana HOM05D002809 ORTHO05D004563 5.2e-06 56.2 131 33.6
SalBow7G1945 Salvia bowleyana HOM05D000007 ORTHO05D000521 5.2e-06 56.2 154 28.6
Sp5g01820 Schrenkiella parvula HOM05D003005 ORTHO05D004170 5.2e-06 56.2 156 29.5
Solyc05g015520.3 Solanum lycopersicum HOM05D002809 ORTHO05D004563 5.2e-06 56.2 270 25.2
BolC5t31323H Brassica oleracea HOM05D002809 ORTHO05D004563 6.8e-06 55.8 127 33.1
BraA09t39366Z Brassica rapa HOM05D002809 ORTHO05D004563 6.8e-06 55.8 145 31.0
CiPaw.06G103600 Carya illinoinensis HOM05D002809 ORTHO05D004563 6.8e-06 55.8 131 31.3
Sabra03G0125400 Salix brachista HOM05D002809 ORTHO05D004563 6.8e-06 55.8 132 31.8
Hund06095 Selenicereus undatus HOM05D002809 ORTHO05D004563 6.8e-06 55.8 161 32.9
VMungo1383G2061 Vigna mungo HOM05D002809 ORTHO05D004563 6.8e-06 55.8 132 31.8
CiPaw.05G108500 Carya illinoinensis HOM05D002809 ORTHO05D004563 8.8e-06 55.5 131 32.1
Migut.K00952 Erythranthe guttata HOM05D002809 ORTHO05D004563 8.8e-06 55.5 157 29.9
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 8.8e-06 55.5 132 34.8
Manes.13G010700 Manihot esculenta HOM05D002809 ORTHO05D004563 8.8e-06 55.5 131 32.8
Rhsim12G0092200 Rhododendron simsii HOM05D002809 ORTHO05D004563 8.8e-06 55.5 155 30.3


User provided reference genes

Program Settings