Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 3.1e-112 408.7 234 100.0
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 3.4e-47 192.6 179 56.4
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 5.9e-47 191.8 197 54.3
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 3.2e-37 159.5 147 55.1
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.1e-36 156.8 167 50.9
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.7e-36 156.4 167 50.3
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 2.7e-36 156.4 167 50.3
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 4.7e-36 155.6 169 49.1
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 6.1e-36 155.2 147 52.4
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 7.9e-36 154.8 145 51.0
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 1.4e-35 154.1 169 49.7
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.8e-35 153.7 146 52.7
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.3e-35 153.3 146 53.4
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.3e-35 153.3 146 53.4
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 2.3e-35 153.3 169 49.1
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 3.9e-35 152.5 146 51.4
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 3.9e-35 152.5 146 52.1
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 3.9e-35 152.5 146 52.7
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 3.9e-35 152.5 146 52.7
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 6.7e-35 151.8 147 52.4
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 8.8e-35 151.4 171 46.2
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 8.8e-35 151.4 148 62.2
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 8.8e-35 151.4 144 52.8
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 1.1e-34 151.0 151 53.0
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 1.5e-34 150.6 147 54.4
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 2.0e-34 150.2 148 53.4
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 2.6e-34 149.8 144 54.2
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 3.3e-34 149.4 146 53.4
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 3.3e-34 149.4 150 63.3
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 3.3e-34 149.4 147 53.7
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 3.3e-34 149.4 147 53.1
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 7.4e-34 148.3 146 53.4
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 9.7e-34 147.9 179 52.5
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 9.7e-34 147.9 179 52.5
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 9.7e-34 147.9 179 52.5
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 1.3e-33 147.5 147 48.3
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 1.3e-33 147.5 144 52.1
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 1.7e-33 147.1 149 52.3
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 2.2e-33 146.7 144 54.2
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 2.8e-33 146.4 145 53.1
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 3.7e-33 146.0 144 52.1
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 3.7e-33 146.0 160 50.0
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 3.7e-33 146.0 147 51.7
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 3.7e-33 146.0 148 51.4
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 4.8e-33 145.6 156 48.7
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 4.8e-33 145.6 156 48.7
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 4.8e-33 145.6 145 51.7
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 6.3e-33 145.2 168 45.2
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 6.3e-33 145.2 146 51.4
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 6.3e-33 145.2 151 51.0
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 6.3e-33 145.2 151 51.0
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 6.3e-33 145.2 149 59.7
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 8.2e-33 144.8 160 49.4
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.1e-32 144.4 147 51.0
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 1.4e-32 144.1 144 52.1
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 1.4e-32 144.1 167 48.5
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 1.4e-32 144.1 147 51.7
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 1.4e-32 144.1 146 50.7
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 1.4e-32 144.1 150 49.3
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 2.4e-32 143.3 147 51.0
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 2.4e-32 143.3 146 53.4
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 2.4e-32 143.3 165 47.3
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 2.4e-32 143.3 168 47.6
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 3.1e-32 142.9 148 50.7
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 9.1e-32 141.4 163 46.6
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 1.6e-31 140.6 170 47.1
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 1.6e-31 140.6 147 54.4
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 2.6e-31 139.8 164 46.3
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 2.6e-31 139.8 144 51.4
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 3.5e-31 139.4 177 45.8
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 4.5e-31 139.0 168 45.8
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 4.5e-31 139.0 146 50.0
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 4.5e-31 139.0 168 45.8
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 7.7e-31 138.3 175 45.7
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 1.7e-30 137.1 150 48.7
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.7e-30 137.1 173 44.5
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 6.5e-30 135.2 136 52.2
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 1.5e-29 134.0 147 55.1
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.5e-29 134.0 163 45.4
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 1.5e-29 134.0 142 50.7
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 4.2e-29 132.5 122 54.1
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 4.2e-29 132.5 136 48.5
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 5.5e-29 132.1 148 49.3
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 7.2e-29 131.7 135 52.6
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.6e-28 130.6 144 45.1
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 1.6e-28 130.6 179 42.5
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.4e-27 127.5 153 47.7
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 4.0e-27 125.9 145 46.9
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 2.6e-26 123.2 137 47.4
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 2.8e-25 119.8 163 41.7
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 3.8e-22 109.4 164 40.2
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 5.0e-22 109.0 155 40.0
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 6.5e-22 108.6 170 41.2
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 3.6e-20 102.8 148 41.9
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 3.4e-18 96.3 105 46.7
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 2.2e-17 93.6 105 45.7
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 3.7e-17 92.8 135 42.2
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 9.1e-16 88.2 82 54.9
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 7.7e-15 85.1 149 36.2
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 3.8e-14 82.8 92 46.7
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 1.6e-12 77.4 106 40.6
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 7.5e-10 68.6 82 46.3
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 4.9e-09 65.9 65 52.3
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 8.3e-09 65.1 147 32.0
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 2.4e-08 63.5 160 31.9
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 3.5e-07 59.7 56 51.8
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 3.8e-06 56.2 56 48.2


User provided reference genes

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