Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.3e-145 518.5 284 100.0
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 1.0e-53 214.5 272 49.3
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 8.4e-40 168.3 288 41.7
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 2.5e-39 166.8 268 40.7
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 5.5e-39 165.6 269 42.0
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.0e-37 161.4 276 39.1
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.8e-37 160.6 267 41.6
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.8e-37 160.6 276 41.3
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.8e-37 160.6 262 39.7
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.3e-37 160.2 264 40.2
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.3e-37 160.2 270 40.7
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 3.9e-37 159.5 272 40.8
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 5.1e-37 159.1 270 41.5
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 6.7e-37 158.7 273 42.1
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 6.7e-37 158.7 271 38.7
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 1.9e-36 157.1 277 40.1
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.5e-36 156.8 272 39.7
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 2.5e-36 156.8 269 39.4
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 2.5e-36 156.8 298 39.6
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 3.3e-36 156.4 265 39.6
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.3e-36 156.4 279 39.8
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 4.3e-36 156.0 265 40.4
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 5.7e-36 155.6 271 38.7
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.3e-35 154.5 261 41.0
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.3e-35 154.5 265 39.2
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.3e-35 154.5 272 39.3
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.3e-35 154.5 276 40.2
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.3e-35 154.5 231 45.0
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.6e-35 154.1 265 39.2
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 4.8e-35 152.5 278 40.3
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 4.8e-35 152.5 275 40.4
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.8e-35 152.5 261 39.5
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.8e-35 152.5 237 41.4
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.3e-35 152.1 261 39.5
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 8.2e-35 151.8 266 39.8
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 8.2e-35 151.8 263 38.4
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.4e-34 151.0 233 44.6
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.4e-34 151.0 266 39.8
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.8e-34 150.6 286 38.8
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.8e-34 150.6 271 37.6
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.8e-34 150.6 273 40.7
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 5.3e-34 149.1 160 53.8
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 5.3e-34 149.1 263 40.3
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 5.3e-34 149.1 269 40.1
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 6.9e-34 148.7 285 39.6
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 6.9e-34 148.7 235 41.7
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 9.0e-34 148.3 228 43.9
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 1.2e-33 147.9 267 38.6
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 1.2e-33 147.9 271 41.7
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.5e-33 147.5 176 49.4
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 2.0e-33 147.1 154 53.9
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 2.0e-33 147.1 272 37.9
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 2.0e-33 147.1 281 38.1
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 2.0e-33 147.1 149 55.7
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 2.6e-33 146.7 151 55.0
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 3.4e-33 146.4 162 51.9
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 3.4e-33 146.4 162 51.9
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 3.4e-33 146.4 233 42.1
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 3.4e-33 146.4 279 37.6
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 4.5e-33 146.0 269 39.4
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 4.5e-33 146.0 176 48.9
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 4.5e-33 146.0 230 42.6
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 4.5e-33 146.0 230 42.6
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 4.5e-33 146.0 241 43.6
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 4.5e-33 146.0 270 38.5
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 5.9e-33 145.6 228 43.0
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 5.9e-33 145.6 236 42.8
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 5.9e-33 145.6 152 55.3
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 7.6e-33 145.2 234 41.0
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 7.6e-33 145.2 261 39.8
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.0e-32 144.8 161 54.0
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.0e-32 144.8 271 39.1
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 1.0e-32 144.8 273 38.5
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 1.0e-32 144.8 264 37.1
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.3e-32 144.4 152 53.9
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.7e-32 144.1 238 42.0
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 2.2e-32 143.7 269 39.4
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.2e-32 143.7 151 54.3
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.9e-32 143.3 235 40.9
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 2.9e-32 143.3 276 38.8
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 3.8e-32 142.9 263 41.1
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 5.0e-32 142.5 281 40.6
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.1e-31 141.4 230 42.2
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 1.4e-31 141.0 263 39.5
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.5e-31 140.2 291 37.5
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 3.2e-31 139.8 152 51.3
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 5.5e-31 139.0 272 39.7
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 5.5e-31 139.0 271 38.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.6e-30 137.5 148 52.0
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.6e-30 137.5 273 39.2
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 2.1e-30 137.1 155 51.0
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.1e-30 137.1 241 41.5
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 2.7e-30 136.7 147 52.4
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 3.6e-30 136.3 273 37.4
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 3.6e-30 136.3 270 37.0
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 4.6e-30 136.0 270 36.3
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 7.9e-30 135.2 281 37.0
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 7.9e-30 135.2 270 37.4
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 1.3e-29 134.4 154 51.3
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.8e-29 134.0 156 52.6
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.8e-29 134.0 270 38.5
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 3.0e-29 133.3 126 58.7
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 3.0e-29 133.3 134 54.5
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 6.7e-29 132.1 271 37.3
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 6.7e-29 132.1 267 36.7
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 8.7e-29 131.7 261 37.5
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 1.9e-28 130.6 133 52.6
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 4.3e-28 129.4 279 37.6
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 5.7e-28 129.0 169 46.2
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 5.7e-28 129.0 279 37.6
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 7.4e-28 128.6 279 37.6
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 1.6e-27 127.5 124 53.2
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 1.6e-27 127.5 277 35.7
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.2e-27 127.1 125 56.0
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 8.2e-27 125.2 125 54.4
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.8e-26 124.0 279 33.3
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 9.0e-26 121.7 275 36.4
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 4.6e-22 109.4 121 48.8
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 1.8e-18 97.4 149 45.0
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 4.1e-18 96.3 148 42.6
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.9e-14 82.0 161 36.0
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 1.4e-10 71.2 196 34.2
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 7.7e-09 65.5 167 32.9


User provided reference genes

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