Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 5.0e-105 384.4 188 100.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 5.0e-105 384.4 188 100.0
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 4.1e-43 178.7 123 66.7
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 5.0e-41 171.8 99 79.8
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 5.1e-33 145.2 109 60.6
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 5.1e-33 145.2 121 55.4
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 5.6e-32 141.7 155 47.1
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 7.3e-32 141.4 121 53.7
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 9.5e-32 141.0 182 43.4
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 9.5e-32 141.0 126 52.4
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.6e-31 140.2 177 44.6
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 2.8e-31 139.4 121 53.7
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 3.6e-31 139.0 165 44.8
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 6.2e-31 138.3 141 48.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 8.1e-31 137.9 136 50.7
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 8.1e-31 137.9 121 50.4
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 1.1e-30 137.5 117 55.6
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.1e-30 137.5 110 56.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.1e-30 137.5 110 56.4
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 2.4e-30 136.3 120 54.2
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 4.0e-30 135.6 120 50.8
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 4.0e-30 135.6 120 51.7
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 4.0e-30 135.6 124 54.8
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 4.0e-30 135.6 125 52.8
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 4.0e-30 135.6 125 52.8
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 4.0e-30 135.6 125 52.8
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 4.0e-30 135.6 125 52.8
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 4.0e-30 135.6 122 50.0
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 5.2e-30 135.2 124 51.6
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 5.2e-30 135.2 114 53.5
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 5.2e-30 135.2 120 50.8
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.2e-30 135.2 109 56.9
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 5.2e-30 135.2 141 46.8
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 6.8e-30 134.8 182 39.6
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 8.9e-30 134.4 124 53.2
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.2e-29 134.0 169 43.2
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.2e-29 134.0 139 50.4
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.5e-29 133.7 121 52.1
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.5e-29 133.7 101 60.4
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.0e-29 133.3 101 59.4
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.0e-29 133.3 103 58.3
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 2.0e-29 133.3 133 51.9
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 2.6e-29 132.9 124 52.4
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 2.6e-29 132.9 178 41.0
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.6e-29 132.9 124 50.0
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 2.6e-29 132.9 135 51.9
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 3.4e-29 132.5 120 52.5
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 3.4e-29 132.5 120 52.5
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 3.4e-29 132.5 124 50.0
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 3.4e-29 132.5 121 52.9
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 3.4e-29 132.5 114 57.0
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 3.4e-29 132.5 128 53.1
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 4.4e-29 132.1 112 54.5
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 4.4e-29 132.1 124 51.6
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 5.8e-29 131.7 108 55.6
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 5.8e-29 131.7 123 52.0
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 7.6e-29 131.3 98 60.2
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 7.6e-29 131.3 121 51.2
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 9.9e-29 131.0 115 53.0
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 9.9e-29 131.0 103 57.3
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 9.9e-29 131.0 118 53.4
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 1.3e-28 130.6 108 54.6
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.7e-28 130.2 173 43.9
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.7e-28 130.2 128 49.2
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 2.2e-28 129.8 101 57.4
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 2.2e-28 129.8 110 54.5
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 2.9e-28 129.4 109 53.2
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.9e-28 129.4 101 59.4
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 2.9e-28 129.4 101 58.4
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 4.9e-28 128.6 136 50.0
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 6.4e-28 128.3 113 51.3
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 6.4e-28 128.3 124 51.6
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 6.4e-28 128.3 103 56.3
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 8.4e-28 127.9 106 55.7
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 1.1e-27 127.5 99 58.6
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.1e-27 127.5 123 52.0
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.4e-27 127.1 119 50.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.4e-27 127.1 110 52.7
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.4e-27 127.1 112 51.8
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 1.4e-27 127.1 103 56.3
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.9e-27 126.7 101 54.5
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.4e-27 126.3 116 50.9
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 2.4e-27 126.3 119 50.4
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.4e-27 126.3 116 50.9
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.4e-27 126.3 115 53.0
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.4e-27 126.3 101 57.4
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 3.2e-27 125.9 112 50.9
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 4.1e-27 125.6 119 47.9
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 4.1e-27 125.6 154 43.5
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 4.1e-27 125.6 109 50.5
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 5.4e-27 125.2 125 49.6
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 9.2e-27 124.4 124 47.6
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 9.2e-27 124.4 101 55.4
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.6e-26 123.6 127 49.6
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 2.1e-26 123.2 116 49.1
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 2.7e-26 122.9 109 51.4
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 2.7e-26 122.9 109 51.4
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 2.7e-26 122.9 109 51.4
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.0e-25 120.9 119 50.4
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 9.6e-24 114.4 97 54.6
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 6.2e-23 111.7 84 60.7
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 6.2e-23 111.7 85 60.0
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.4e-22 110.5 84 59.5
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 2.2e-20 103.2 84 56.0
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 2.1e-07 60.1 37 64.9


User provided reference genes

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