Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0076 Marchantia polymorpha HOM05D013579 ORTHO05D015305 6.4e-208 727.2 385 100.0
Pp3c16_12300 Physcomitrium patens HOM05D013579 ORTHO05D001508 5.3e-45 186.0 428 37.4
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 1.7e-43 181.0 421 35.2
Pp3c5_5250 Physcomitrium patens HOM05D013579 ORTHO05D015305 3.1e-37 160.2 428 33.2
Pp3c6_24870 Physcomitrium patens HOM05D013579 ORTHO05D015305 3.1e-37 160.2 421 33.3
Pp3c14_19700 Physcomitrium patens HOM05D013579 ORTHO05D015305 2.7e-33 147.1 427 33.3
Pp3c2_10100 Physcomitrium patens HOM05D013579 ORTHO05D003690 3.0e-24 117.1 415 30.6
Pp3c17_15140 Physcomitrium patens HOM05D013579 ORTHO05D015305 5.7e-23 112.8 426 31.9
Pp3c17_15100 Physcomitrium patens HOM05D018002 ORTHO05D015305 1.6e-20 104.8 324 33.3
Pp3c14_19730 Physcomitrium patens HOM05D018002 ORTHO05D015305 7.2e-18 95.9 324 28.1
Mapoly0029s0070 Marchantia polymorpha HOM05D018002 ORTHO05D015305 1.2e-17 95.1 316 29.1
Pp3c1_28820 Physcomitrium patens HOM05D013579 ORTHO05D003690 1.0e-16 92.0 372 27.7
AagrBONN_evm.TU.Sc2ySwM_228.4078 Anthoceros agrestis HOM05D013579 ORTHO05D015305 2.8e-14 84.0 215 34.9
Pp3c2_10130 Physcomitrium patens HOM05D018002 ORTHO05D015305 5.3e-13 79.7 337 27.0
SMO146G0238 Selaginella moellendorffii HOM05D003316 ORTHO05D003690 2.7e-12 77.4 389 25.7
SMO118G0502 Selaginella moellendorffii HOM05D013579 ORTHO05D003690 1.1e-10 72.0 115 40.9
FAN25G0335 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.4e-08 65.1 336 26.2
FAN11G0988 Fragaria x ananassa HOM05D003316 ORTHO05D003690 2.3e-08 64.3 335 25.7
SEGI_23541 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.3e-08 64.3 78 44.9
FvH4_3g15360 Fragaria vesca HOM05D003316 ORTHO05D003690 3.0e-08 63.9 335 25.7
Cc11_g17440 Coffea canephora HOM05D003968 ORTHO05D004077 6.8e-08 62.8 58 48.3
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 6.8e-08 62.8 317 25.6
FAN21G3518 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.2e-07 62.0 335 26.9
PSO229G0040 Papaver somniferum HOM05D003968 ORTHO05D004077 1.2e-07 62.0 51 51.0
PSO675G4434 Papaver somniferum HOM05D003968 ORTHO05D004077 1.2e-07 62.0 51 51.0
FAN16G3516 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.5e-07 61.6 335 25.4
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 1.5e-07 61.6 168 32.1
DCAR_024638 Daucus carota HOM05D003968 ORTHO05D004077 2.6e-07 60.8 98 34.7
Duzib213G0545 Durio zibethinus HOM05D003316 ORTHO05D003690 2.6e-07 60.8 319 25.1
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.6e-07 60.8 307 25.7
BcaC02g07799 Brassica carinata HOM05D003968 ORTHO05D004077 3.4e-07 60.5 99 36.4
A04p25820 Brassica napus HOM05D003968 ORTHO05D004077 3.4e-07 60.5 62 46.8
PGR057G0001 Punica granatum HOM05D003968 ORTHO05D004077 3.4e-07 60.5 58 46.6
PGR119G2322 Punica granatum HOM05D003968 ORTHO05D004077 3.4e-07 60.5 58 46.6
C04p63030 Brassica napus HOM05D003968 ORTHO05D004077 9.8e-07 58.9 97 36.1
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 9.8e-07 58.9 318 25.2
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 1.3e-06 58.5 308 23.7
Haze_12469 Corylus avellana HOM05D003968 ORTHO05D004077 1.3e-06 58.5 61 41.0
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 1.7e-06 58.2 318 23.9
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 1.7e-06 58.2 307 25.4
SEGI_20858 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 2.2e-06 57.8 40 62.5
unitig_747.g21116 Utricularia gibba HOM05D003968 ORTHO05D004077 2.2e-06 57.8 59 45.8
TAR629G0662 Trochodendron aralioides HOM05D003968 ORTHO05D004077 2.8e-06 57.4 61 39.3
vmacro22632 Vaccinium macrocarpon HOM05D003968 ORTHO05D004077 2.8e-06 57.4 59 40.7
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 3.7e-06 57.0 317 26.8
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 3.7e-06 57.0 355 23.9
BcaB01g03931 Brassica carinata HOM05D003968 ORTHO05D004077 4.8e-06 56.6 44 52.3
A07p11490 Brassica napus HOM05D003968 ORTHO05D004077 4.8e-06 56.6 103 36.9
BraA07t28938Z Brassica rapa HOM05D003968 ORTHO05D004077 4.8e-06 56.6 103 36.9
FAN18G1803 Fragaria x ananassa HOM05D002704 ORTHO05D002891 4.8e-06 56.6 67 43.3
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 4.8e-06 56.6 329 24.6
Solyc04g074080.3 Solanum lycopersicum HOM05D002704 ORTHO05D002891 4.8e-06 56.6 46 50.0
THA.LOC104814203 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 4.8e-06 56.6 76 36.8
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 6.3e-06 56.2 340 23.5
Aqoxy5G03211 Aquilegia oxysepala HOM05D003968 ORTHO05D004077 6.3e-06 56.2 55 43.6
AT2G33510 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 6.3e-06 56.2 79 40.5
BcaC02g11436 Brassica carinata HOM05D003968 ORTHO05D004077 6.3e-06 56.2 66 39.4
A05p12030 Brassica napus HOM05D003968 ORTHO05D004077 6.3e-06 56.2 66 39.4
C04p15610 Brassica napus HOM05D003968 ORTHO05D004077 6.3e-06 56.2 66 39.4
Cfa009411 Carpinus fangiana HOM05D003968 ORTHO05D004077 6.3e-06 56.2 66 37.9
ECA233G5077 Erigeron canadensis HOM05D003968 ORTHO05D004077 6.3e-06 56.2 43 53.5
MD13G1126400 Malus domestica HOM05D003968 ORTHO05D004077 6.3e-06 56.2 66 40.9
Nn4g22193 Nelumbo nucifera HOM05D003968 ORTHO05D004077 6.3e-06 56.2 65 38.5
RcHm_v2.0_Chr7g0239041 Rosa chinensis HOM05D002704 ORTHO05D002891 6.3e-06 56.2 61 41.0
Actinidia30604 Actinidia chinensis HOM05D003968 ORTHO05D004077 8.3e-06 55.8 81 37.0
Thhalv10017284m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 8.3e-06 55.8 62 41.9
MD10G1205200 Malus domestica HOM05D003316 ORTHO05D003690 8.3e-06 55.8 320 22.8
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 8.3e-06 55.8 307 24.4
GSVIVG01013547001 Vitis vinifera HOM05D002704 ORTHO05D002891 8.3e-06 55.8 132 27.3


User provided reference genes

Program Settings