Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0056 Marchantia polymorpha HOM05D002925 ORTHO05D003247 0.0e+00 2098.6 1092 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1795 Anthoceros agrestis HOM05D002925 ORTHO05D003247 1.5e-12 79.7 133 36.1
Sc23g0000240 Simmondsia chinensis HOM05D002925 ORTHO05D003247 1.1e-10 73.6 83 45.8
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 1.2e-09 70.1 378 26.5
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 1.6e-09 69.7 403 25.6
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 1.7e-08 66.2 412 26.5
TPR.G36116 Trifolium pratense HOM05D002925 ORTHO05D003247 1.7e-08 66.2 117 35.9
SMO356G0592 Selaginella moellendorffii HOM05D002925 ORTHO05D003247 2.3e-08 65.9 80 37.5
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 2.3e-08 65.9 390 25.9
ATR0782G164 Amborella trichopoda HOM05D002925 ORTHO05D003247 3.0e-08 65.5 487 21.8
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 5.0e-08 64.7 397 27.0
Medtr2g009040 Medicago truncatula HOM05D002925 ORTHO05D003247 5.0e-08 64.7 82 42.7
SEGI_07396 Sequoiadendron giganteum HOM05D002925 ORTHO05D003247 5.0e-08 64.7 438 23.7
GSVIVG01015726001 Vitis vinifera HOM05D002925 ORTHO05D003247 5.0e-08 64.7 151 35.1
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 6.6e-08 64.3 82 40.2
Os08g0485700 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 6.6e-08 64.3 103 35.9
SMO339G0027 Selaginella moellendorffii HOM05D000329 ORTHO05D000833 1.5e-07 63.2 116 31.9
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 1.9e-07 62.8 82 40.2
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.3e-07 62.0 82 37.8
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.3e-07 62.0 82 37.8
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 3.3e-07 62.0 373 26.3
CAN.G523.55 Capsicum annuum HOM05D002925 ORTHO05D003247 4.3e-07 61.6 79 43.0
Cfa005642 Carpinus fangiana HOM05D002925 ORTHO05D003247 4.3e-07 61.6 166 31.9
Gorai.005G221500 Gossypium raimondii HOM05D002925 ORTHO05D003247 4.3e-07 61.6 394 28.9
Gohir.A03G174900 Gossypium hirsutum HOM05D002925 ORTHO05D003247 5.6e-07 61.2 391 29.2
SEGI_20319 Sequoiadendron giganteum HOM05D002925 ORTHO05D003247 5.6e-07 61.2 55 52.7
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 5.6e-07 61.2 439 23.9
Gohir.D02G198200 Gossypium hirsutum HOM05D002925 ORTHO05D003247 7.3e-07 60.8 394 28.4
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 7.3e-07 60.8 367 26.4
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 7.3e-07 60.8 371 26.7
DCAR_021679 Daucus carota HOM05D003353 ORTHO05D003751 1.6e-06 59.7 68 42.6
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 4.7e-06 58.2 373 24.7
HanXRQChr09g0266041 Helianthus annuus HOM05D003353 ORTHO05D003751 6.2e-06 57.8 76 35.5
Duzib116G0838 Durio zibethinus HOM05D002925 ORTHO05D003247 8.1e-06 57.4 395 23.0
Lj6g0011498 Lotus japonicus HOM05D002415 ORTHO05D002522 8.1e-06 57.4 60 41.7
Hund12469 Selenicereus undatus HOM05D003353 ORTHO05D003751 8.1e-06 57.4 113 32.7


User provided reference genes

Program Settings