Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 2.0e-152 542.3 261 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 1.4e-57 227.3 245 46.5
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 2.6e-51 206.5 208 49.0
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 1.3e-50 204.1 251 45.4
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 8.3e-50 201.4 198 49.0
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 1.8e-49 200.3 207 48.3
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 2.4e-49 199.9 253 45.8
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 4.1e-49 199.1 207 48.3
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 4.1e-49 199.1 254 41.3
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 1.2e-48 197.6 207 48.3
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 2.0e-48 196.8 250 42.0
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 3.5e-48 196.1 215 46.0
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 3.5e-48 196.1 247 44.9
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 4.5e-48 195.7 252 42.1
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 5.9e-48 195.3 253 43.9
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 7.7e-48 194.9 207 46.9
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.0e-47 194.5 254 42.9
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.0e-47 194.5 257 42.4
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 1.3e-47 194.1 251 43.0
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.3e-47 194.1 207 47.3
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 1.7e-47 193.7 251 45.0
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.7e-47 193.7 257 42.8
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 2.2e-47 193.4 208 47.1
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 3.8e-47 192.6 207 47.3
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 5.0e-47 192.2 226 41.2
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 6.5e-47 191.8 215 46.0
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 6.5e-47 191.8 243 44.0
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 8.5e-47 191.4 254 42.9
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 8.5e-47 191.4 251 43.0
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 8.5e-47 191.4 252 43.7
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.1e-46 191.0 247 40.9
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 1.1e-46 191.0 251 43.4
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 1.5e-46 190.7 249 43.4
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 1.9e-46 190.3 207 44.9
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 1.9e-46 190.3 252 43.3
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 2.5e-46 189.9 255 41.2
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 4.2e-46 189.1 207 45.4
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 4.2e-46 189.1 256 40.6
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 7.2e-46 188.3 247 42.9
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 9.4e-46 188.0 207 46.4
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 1.2e-45 187.6 208 46.2
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 1.2e-45 187.6 204 46.1
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 1.2e-45 187.6 255 40.8
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 1.2e-45 187.6 207 46.4
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 1.2e-45 187.6 207 46.4
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 1.6e-45 187.2 213 45.5
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 2.1e-45 186.8 216 44.9
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 2.1e-45 186.8 244 39.8
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 2.1e-45 186.8 252 42.5
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 3.6e-45 186.0 207 44.9
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.7e-45 185.7 246 39.8
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 4.7e-45 185.7 246 41.5
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 8.0e-45 184.9 207 45.4
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 1.0e-44 184.5 207 44.9
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 1.0e-44 184.5 207 44.9
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 1.8e-44 183.7 240 40.8
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.8e-44 183.7 209 44.5
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 2.3e-44 183.3 205 44.9
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 2.3e-44 183.3 205 47.3
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 3.0e-44 183.0 200 45.0
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 4.0e-44 182.6 250 40.4
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 6.8e-44 181.8 251 39.4
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 6.8e-44 181.8 254 40.9
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 1.2e-43 181.0 207 44.9
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 1.5e-43 180.6 228 42.1
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 3.4e-43 179.5 207 44.4
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 5.7e-43 178.7 207 43.5
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.5e-43 178.3 199 45.2
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.5e-43 178.3 199 45.2
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 7.5e-43 178.3 242 42.1
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 9.8e-43 177.9 252 41.3
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.3e-42 177.6 207 43.0
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 1.3e-42 177.6 245 39.6
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 1.3e-42 177.6 246 39.8
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.7e-42 177.2 207 43.5
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 1.7e-42 177.2 244 40.6
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 1.7e-42 177.2 251 40.2
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 1.7e-42 177.2 207 44.9
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 2.2e-42 176.8 253 41.5
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 2.8e-42 176.4 255 39.6
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 3.7e-42 176.0 245 38.8
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 4.9e-42 175.6 251 37.5
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 4.9e-42 175.6 251 41.4
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 1.8e-41 173.7 198 44.9
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.8e-41 173.7 198 44.9
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.8e-41 173.7 198 44.9
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.4e-41 173.3 237 38.8
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 2.4e-41 173.3 229 42.8
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 9.2e-41 171.4 198 44.4
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 9.2e-41 171.4 198 44.4
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 2.0e-40 170.2 207 41.5
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 4.5e-40 169.1 224 43.8
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 7.7e-40 168.3 198 44.4
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 1.3e-39 167.5 254 37.8
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.3e-39 167.5 208 42.8
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 4.3e-38 162.5 223 38.1
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 5.6e-38 162.2 188 42.6
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.6e-37 160.6 229 38.0
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 1.6e-37 160.6 262 35.9
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 2.1e-37 160.2 192 43.8
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 3.0e-36 156.4 171 46.2
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.0e-35 153.7 192 42.2
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 2.6e-35 153.3 204 40.2
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 2.4e-33 146.7 207 39.1
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 4.1e-33 146.0 222 37.8
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 7.0e-33 145.2 198 39.9
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 4.6e-32 142.5 193 43.5
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 1.0e-31 141.4 148 49.3
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 3.9e-31 139.4 241 37.3
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 7.3e-30 135.2 198 39.4
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 1.6e-29 134.0 122 51.6
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 3.1e-28 129.8 209 34.9
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 8.9e-28 128.3 214 36.9
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 2.6e-27 126.7 168 41.1
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 5.8e-27 125.6 172 42.4
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 9.8e-27 124.8 244 33.2
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 3.7e-26 122.9 223 31.8
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 6.4e-26 122.1 338 26.0
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.4e-25 120.2 150 41.3
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 7.0e-25 118.6 260 32.7
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 2.7e-24 116.7 173 37.6
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 1.3e-23 114.4 174 39.7
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 3.3e-22 109.8 152 41.4
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 1.2e-21 107.8 135 42.2
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 1.2e-21 107.8 108 48.1
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 1.6e-21 107.5 248 30.6
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 4.7e-21 105.9 137 37.2
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 2.0e-19 100.5 88 54.5
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 7.5e-19 98.6 113 41.6
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 9.8e-19 98.2 88 51.1
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 1.3e-18 97.8 189 37.0
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.7e-18 97.4 88 51.1
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 8.3e-18 95.1 88 50.0
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 8.3e-18 95.1 132 38.6
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.4e-17 94.4 88 50.0
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 5.4e-17 92.4 124 39.5
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 7.1e-17 92.0 84 48.8
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 1.1e-12 78.2 104 39.4
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.2e-11 74.7 67 44.8
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.5e-11 74.3 67 47.8
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 5.8e-11 72.4 67 44.8
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 2.2e-10 70.5 62 50.0
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 6.4e-10 68.9 99 36.4
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 5.4e-09 65.9 96 39.6
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 1.2e-08 64.7 139 30.9
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 8.6e-07 58.5 59 44.1
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 1.9e-06 57.4 73 41.1
SHI05337 Sapria himalayana HOM05D004561 ORTHO05D005315 2.5e-06 57.0 151 30.5
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 4.3e-06 56.2 59 45.8
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 4.3e-06 56.2 57 43.9


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