Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 0.0e+00 1286.2 678 100.0
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 9.6e-175 617.8 500 65.2
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 8.5e-155 551.6 498 59.8
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 6.7e-144 515.4 500 54.8
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 1.3e-142 511.1 501 53.3
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 4.8e-142 509.2 496 52.8
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.1e-141 508.1 504 53.6
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.4e-141 507.7 496 54.4
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 3.1e-141 506.5 518 53.3
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 7.7e-140 501.9 515 52.0
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.7e-139 500.7 501 51.1
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 2.9e-139 500.0 499 52.3
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 2.5e-138 496.9 502 51.8
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 2.5e-138 496.9 513 56.5
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 7.2e-138 495.4 497 52.5
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.0e-136 491.5 510 51.2
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 5.2e-136 489.2 521 49.3
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 8.8e-136 488.4 512 50.4
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.1e-135 488.0 521 50.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 2.6e-135 486.9 503 51.7
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 3.3e-135 486.5 538 49.8
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.7e-135 485.7 502 51.4
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 5.7e-135 485.7 502 51.4
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.3e-134 484.6 502 51.4
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.3e-134 484.6 523 49.5
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 2.2e-134 483.8 509 50.5
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 3.7e-134 483.0 508 51.0
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 3.7e-134 483.0 506 50.8
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 3.7e-134 483.0 500 52.2
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 4.8e-134 482.6 542 48.5
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 4.8e-134 482.6 523 49.7
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 8.2e-134 481.9 513 51.1
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 8.2e-134 481.9 513 51.1
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 1.4e-133 481.1 522 49.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 2.4e-133 480.3 508 50.8
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 4.1e-133 479.6 505 50.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 7.0e-133 478.8 508 51.8
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 9.1e-133 478.4 508 50.8
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 9.1e-133 478.4 524 50.0
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 9.1e-133 478.4 503 49.9
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.2e-132 478.0 505 49.9
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 1.2e-132 478.0 508 49.6
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 1.2e-132 478.0 500 50.6
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.6e-132 477.6 493 51.9
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 2.0e-132 477.2 519 50.9
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 2.0e-132 477.2 504 50.6
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.6e-132 476.9 505 50.3
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 2.6e-132 476.9 525 49.3
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 4.5e-132 476.1 506 50.8
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 5.9e-132 475.7 484 52.1
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 5.9e-132 475.7 519 50.9
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 7.7e-132 475.3 508 50.4
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 7.7e-132 475.3 507 49.3
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.9e-131 473.4 522 49.6
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 6.5e-131 472.2 507 50.3
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.5e-130 471.1 523 48.8
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 5.5e-130 469.2 516 48.4
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 9.4e-130 468.4 507 48.7
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.6e-129 467.6 524 48.9
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 2.1e-129 467.2 504 49.4
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 6.1e-129 465.7 538 47.6
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 4.0e-128 463.0 487 50.5
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 4.0e-128 463.0 503 48.5
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 6.7e-128 462.2 534 49.1
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 2.6e-127 460.3 565 45.5
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.8e-126 456.8 504 48.8
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 2.8e-126 456.8 484 50.2
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.8e-126 456.8 521 47.0
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 3.1e-125 453.4 503 49.9
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.2e-124 451.4 522 47.7
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 6.5e-123 445.7 466 51.9
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.5e-122 444.5 419 54.2
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 5.5e-122 442.6 523 46.5
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.6e-121 441.0 456 50.9
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.0e-120 438.3 499 48.9
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 1.4e-120 438.0 514 47.9
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 8.8e-120 435.3 477 49.5
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 8.8e-120 435.3 465 50.1
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 8.8e-120 435.3 426 52.8
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 5.7e-119 432.6 504 46.6
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.1e-113 414.1 542 45.0
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.0e-112 410.2 477 47.6
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 6.8e-112 409.1 583 43.2
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 5.0e-107 392.9 523 44.6
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.5e-106 391.3 539 41.9
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 3.3e-106 390.2 423 48.2
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 9.5e-106 388.7 465 46.5
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 5.2e-104 382.9 500 44.6
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.7e-99 367.9 395 47.6
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.1e-98 365.2 525 43.0
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 4.7e-97 359.8 531 42.4
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 3.4e-95 353.6 441 45.4
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 2.4e-93 347.4 321 55.1
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 8.6e-91 339.0 538 40.9
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 1.8e-88 331.3 321 53.3
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.4e-85 321.6 375 45.6
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 1.1e-74 285.4 657 35.2
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.4e-56 225.3 231 52.8
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 6.9e-56 223.0 202 53.5
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.5e-52 210.7 198 57.6
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.9e-37 161.8 198 46.0
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.2e-36 159.1 149 56.4
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.8e-35 155.2 116 71.6
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.7e-35 153.3 189 45.5
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 1.1e-34 152.5 191 45.5
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 9.1e-32 142.9 207 42.0
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 1.4e-29 135.6 157 47.8
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 8.0e-20 103.2 170 35.9
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.8e-16 92.0 157 36.9
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 9.4e-13 79.7 72 59.7
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.7e-09 68.9 60 61.7


User provided reference genes

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