Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0032 Marchantia polymorpha HOM05D012111 ORTHO05D013713 0.0e+00 1577.0 793 100.0
Mapoly0012s0060 Marchantia polymorpha HOM05D012111 ORTHO05D013713 4.8e-194 682.2 598 61.7
Mapoly0012s0142 Marchantia polymorpha HOM05D012111 ORTHO05D013713 5.4e-193 678.7 725 55.9
Mapoly0012s0058 Marchantia polymorpha HOM05D012111 ORTHO05D013713 6.1e-181 638.6 600 58.8
Mapoly0012s0054 Marchantia polymorpha HOM05D012111 ORTHO05D013713 2.6e-171 606.7 770 48.2
Mapoly0116s0035 Marchantia polymorpha HOM05D012111 ORTHO05D013713 4.8e-149 532.7 660 49.1
Mapoly0012s0056 Marchantia polymorpha HOM05D012111 ORTHO05D013713 3.2e-145 520.0 648 48.8
Mapoly0148s0022 Marchantia polymorpha HOM05D012111 ORTHO05D013713 9.3e-137 491.9 506 55.9
Mapoly0148s0021 Marchantia polymorpha HOM05D012111 ORTHO05D013713 1.2e-59 235.7 254 53.9
Mapoly0067s0062 Marchantia polymorpha HOM05D012111 ORTHO05D013713 1.3e-37 162.5 645 26.7
Mapoly0067s0063 Marchantia polymorpha HOM05D012111 ORTHO05D013713 1.1e-36 159.5 631 26.8
Mapoly0073s0006 Marchantia polymorpha HOM05D012111 ORTHO05D013713 1.1e-28 132.9 596 27.0
Mapoly0089s0024 Marchantia polymorpha HOM05D012111 ORTHO05D013713 1.3e-16 92.8 70 70.0
Migut.J00760 Erythranthe guttata HOM05D004225 ORTHO05D004728 1.3e-08 66.2 98 41.8
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 2.8e-08 65.1 149 32.2
AagrBONN_evm.TU.Sc2ySwM_344.5184 Anthoceros agrestis HOM05D009890 ORTHO05D011110 1.4e-07 62.8 245 24.1
AagrBONN_evm.TU.Sc2ySwM_344.5137 Anthoceros agrestis HOM05D014365 ORTHO05D011110 1.8e-07 62.4 347 25.1
Eucgr.A02119 Eucalyptus grandis HOM05D004225 ORTHO05D004728 2.4e-07 62.0 106 35.8
Glyma.11G140000 Glycine max HOM05D002192 ORTHO05D002173 3.1e-07 61.6 167 32.3
Lsat_1_v5_gn_8_7120 Lactuca sativa HOM05D001854 ORTHO05D001800 3.1e-07 61.6 167 30.5
arahy.Tifrunner.gnm1.ann1.4I2AVL Arachis hypogaea HOM05D004225 ORTHO05D004728 4.1e-07 61.2 138 31.2
arahy.Tifrunner.gnm1.ann1.MX8T8B Arachis hypogaea HOM05D004225 ORTHO05D004728 4.1e-07 61.2 138 31.2
Glyma.12G063600 Glycine max HOM05D002192 ORTHO05D002173 4.1e-07 61.2 167 32.3
Lj1g0011347 Lotus japonicus HOM05D004225 ORTHO05D004728 4.1e-07 61.2 138 31.2
Sc25g0000410 Simmondsia chinensis HOM05D001854 ORTHO05D001800 4.1e-07 61.2 139 36.0
Zm00001eb300770 Zea mays HOM05D004225 ORTHO05D004728 5.3e-07 60.8 107 37.4
AagrBONN_evm.TU.Sc2ySwM_344.3244 Anthoceros agrestis HOM05D023120 ORTHO05D011110 1.2e-06 59.7 283 26.1
Phvul.011G064600 Phaseolus vulgaris HOM05D002192 ORTHO05D002173 1.5e-06 59.3 167 31.7
VMungo1127G1464 Vigna mungo HOM05D002192 ORTHO05D002173 1.5e-06 59.3 167 31.7
HanXRQChr14g0453121 Helianthus annuus HOM05D004225 ORTHO05D004728 2.6e-06 58.5 125 33.6
Mapoly0082s0025 Marchantia polymorpha HOM05D004225 ORTHO05D004728 3.4e-06 58.2 92 40.2
Medtr7g086050 Medicago truncatula HOM05D004225 ORTHO05D004728 3.4e-06 58.2 100 39.0
Hund28404 Selenicereus undatus HOM05D001854 ORTHO05D001800 3.4e-06 58.2 139 35.3
Hund28407 Selenicereus undatus HOM05D001854 ORTHO05D001800 3.4e-06 58.2 139 35.3
Mapoly0060s0045 Marchantia polymorpha HOM05D009890 ORTHO05D011110 4.5e-06 57.8 161 28.6
Zm00001eb190210 Zea mays HOM05D004225 ORTHO05D004728 4.5e-06 57.8 103 35.9
Ah.12g059700 Amaranthus hybridus HOM05D004225 ORTHO05D004728 5.9e-06 57.4 121 37.2
Ah.16g104880 Amaranthus hybridus HOM05D000264 ORTHO05D000152 5.9e-06 57.4 111 30.6
BcaB05g21626 Brassica carinata HOM05D001854 ORTHO05D001800 5.9e-06 57.4 129 34.1
Ciclev10004762m.g Citrus clementina HOM05D001854 ORTHO05D001800 5.9e-06 57.4 114 37.7
Phvul.L004743 Phaseolus vulgaris HOM05D002192 ORTHO05D002173 5.9e-06 57.4 149 32.2
Rhsim06G0042700 Rhododendron simsii HOM05D010878 ORTHO05D009673 5.9e-06 57.4 105 34.3
VMungo1080G1292 Vigna mungo HOM05D002192 ORTHO05D002173 5.9e-06 57.4 149 32.2
AagrBONN_evm.TU.Sc2ySwM_344.863 Anthoceros agrestis HOM05D014365 ORTHO05D011110 7.6e-06 57.0 96 40.6
MSTRG.27128 Avicennia marina HOM05D001854 ORTHO05D001800 7.6e-06 57.0 98 38.8
MSTRG.8752 Avicennia marina HOM05D001854 ORTHO05D001800 7.6e-06 57.0 98 37.8
CSS0023172 Camellia sinensis var. sinensis HOM05D002210 ORTHO05D002304 7.6e-06 57.0 215 27.9
AUR62021218 Chenopodium quinoa HOM05D001854 ORTHO05D001800 7.6e-06 57.0 121 37.2
Ca_08286_v3 Cicer arietinum L. HOM05D004225 ORTHO05D004728 7.6e-06 57.0 100 37.0
Glyma.15G039100 Glycine max HOM05D002192 ORTHO05D002173 7.6e-06 57.0 153 31.4
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.6e-06 57.0 106 35.8
Oeu056233.1 Olea europaea HOM05D001854 ORTHO05D001800 7.6e-06 57.0 115 37.4
Zm00001eb188870 Zea mays HOM05D004225 ORTHO05D004728 7.6e-06 57.0 103 35.9
Aqoxy7G00411 Aquilegia oxysepala HOM05D001854 ORTHO05D001800 1.0e-05 56.6 121 36.4
CAN.G856.8 Capsicum annuum HOM05D001854 ORTHO05D001800 1.0e-05 56.6 98 38.8
ECA233G4735 Erigeron canadensis HOM05D001854 ORTHO05D001800 1.0e-05 56.6 98 38.8
Psat3g087720 Pisum sativum HOM05D004225 ORTHO05D004728 1.0e-05 56.6 100 37.0
Psat3g087760 Pisum sativum HOM05D004225 ORTHO05D004728 1.0e-05 56.6 100 37.0
TPR.G31024 Trifolium pratense HOM05D004225 ORTHO05D004728 1.0e-05 56.6 100 37.0


User provided reference genes

Program Settings