Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 9.4e-264 913.3 574 100.0
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 7.5e-96 355.5 621 50.9
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 2.1e-58 231.1 320 44.1
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 5.8e-56 223.0 296 45.3
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.3e-55 221.9 312 43.9
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.2e-55 221.1 298 45.6
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 6.4e-55 219.5 607 34.6
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 6.4e-55 219.5 366 41.8
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 8.4e-55 219.2 317 46.1
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 2.4e-54 217.6 323 40.9
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 4.2e-54 216.9 578 35.1
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 7.1e-54 216.1 308 43.5
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.2e-53 215.3 316 43.4
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 1.2e-53 215.3 238 53.4
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.6e-53 214.9 595 34.3
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 2.7e-53 214.2 328 43.6
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 2.7e-53 214.2 302 45.7
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.5e-53 213.8 324 43.2
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.0e-52 212.2 297 44.4
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 1.3e-52 211.8 317 43.5
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.8e-52 211.5 336 42.6
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 2.3e-52 211.1 297 44.4
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 2.3e-52 211.1 332 42.5
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.9e-52 210.3 339 42.8
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 3.9e-52 210.3 295 44.4
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 5.1e-52 209.9 314 44.6
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 5.1e-52 209.9 318 42.8
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 5.1e-52 209.9 294 43.9
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 6.7e-52 209.5 324 42.6
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 8.7e-52 209.1 327 43.7
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 1.1e-51 208.8 314 42.7
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 1.5e-51 208.4 403 37.7
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 1.5e-51 208.4 315 42.5
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 1.9e-51 208.0 320 41.6
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 2.5e-51 207.6 312 45.2
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 2.5e-51 207.6 338 42.0
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 4.3e-51 206.8 319 42.0
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 7.4e-51 206.1 305 41.6
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 7.4e-51 206.1 326 42.9
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 9.6e-51 205.7 325 41.5
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 9.6e-51 205.7 318 41.5
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 1.3e-50 205.3 561 36.4
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 1.3e-50 205.3 323 42.1
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 2.1e-50 204.5 311 41.2
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 2.1e-50 204.5 314 42.4
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 2.8e-50 204.1 329 41.9
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 2.8e-50 204.1 553 34.9
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 3.7e-50 203.8 296 42.6
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 4.8e-50 203.4 308 42.5
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 6.2e-50 203.0 313 41.9
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 6.2e-50 203.0 313 41.9
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 6.2e-50 203.0 608 31.9
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 6.2e-50 203.0 599 35.4
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 6.2e-50 203.0 340 41.5
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 8.2e-50 202.6 313 41.5
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 8.2e-50 202.6 319 41.7
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.1e-49 202.2 569 33.0
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 1.1e-49 202.2 578 35.5
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.1e-49 202.2 596 33.4
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 1.4e-49 201.8 313 41.5
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 1.4e-49 201.8 313 41.5
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 1.4e-49 201.8 305 43.3
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 1.8e-49 201.4 296 42.9
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.8e-49 201.4 321 41.1
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.4e-49 201.1 301 43.2
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 3.1e-49 200.7 336 40.8
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 3.1e-49 200.7 297 42.4
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 4.0e-49 200.3 573 32.8
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 6.9e-49 199.5 311 45.0
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 6.9e-49 199.5 336 41.7
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 9.0e-49 199.1 585 33.3
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 2.0e-48 198.0 316 41.5
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 2.0e-48 198.0 304 41.8
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 2.6e-48 197.6 324 41.0
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 3.4e-48 197.2 324 41.0
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 3.4e-48 197.2 308 40.6
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 7.6e-48 196.1 308 44.2
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 1.3e-47 195.3 552 35.3
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 2.2e-47 194.5 279 44.8
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 2.9e-47 194.1 572 35.5
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 3.8e-47 193.7 307 41.0
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 4.9e-47 193.4 581 33.4
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.4e-46 191.8 274 44.2
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 1.9e-46 191.4 339 40.1
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 2.5e-46 191.0 339 39.2
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 3.2e-46 190.7 613 34.7
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 9.3e-46 189.1 285 43.2
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.2e-45 188.7 576 35.9
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 1.2e-45 188.7 576 35.9
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.2e-45 188.7 333 39.3
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.6e-45 188.3 611 33.6
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 3.5e-45 187.2 301 41.9
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 3.5e-45 187.2 591 33.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 4.6e-45 186.8 262 43.9
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 1.0e-44 185.7 554 37.7
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.3e-44 185.3 588 33.8
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 2.3e-44 184.5 293 42.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 3.9e-44 183.7 584 32.0
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 6.7e-44 183.0 608 33.1
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 8.7e-44 182.6 296 40.5
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 4.3e-43 180.3 276 41.7
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 5.7e-43 179.9 200 48.0
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 5.7e-43 179.9 209 49.8
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 7.4e-43 179.5 615 32.0
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 1.3e-42 178.7 184 50.0
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 8.5e-39 166.0 279 40.9
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 4.2e-38 163.7 339 37.5
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 5.5e-38 163.3 260 40.4
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 7.2e-38 162.9 216 41.2
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 2.1e-37 161.4 218 42.2
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.1e-37 161.4 248 41.9
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 3.6e-37 160.6 211 42.7
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 6.7e-36 156.4 223 39.0
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 4.5e-32 143.7 247 35.6
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 6.3e-26 123.2 212 39.6
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 6.5e-23 113.2 211 37.0
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 3.2e-22 110.9 231 34.2
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 1.2e-21 109.0 303 30.4
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 2.1e-21 108.2 129 50.4
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.7e-18 98.6 189 37.0
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 4.8e-18 97.1 106 46.2
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 4.7e-13 80.5 81 48.1
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.5e-11 75.5 202 35.6
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 4.5e-08 63.9 64 50.0
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 5.9e-08 63.5 69 42.0


User provided reference genes

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