Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 3.1e-90 335.1 168 100.0
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 7.7e-57 224.2 119 85.7
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 7.7e-57 224.2 119 85.7
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.9e-53 211.8 137 70.8
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.1e-50 201.8 122 72.1
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.1e-50 201.8 122 71.3
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 4.5e-49 198.4 122 69.7
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 1.7e-48 196.4 122 70.5
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.5e-48 194.5 123 68.3
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.4e-47 193.4 122 69.7
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.9e-47 193.0 122 68.0
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.9e-47 193.0 122 68.9
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 2.5e-47 192.6 122 68.0
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 2.5e-47 192.6 122 68.9
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 7.2e-47 191.0 122 68.0
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 7.2e-47 191.0 122 68.9
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 7.2e-47 191.0 122 66.4
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 9.4e-47 190.7 122 67.2
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 9.4e-47 190.7 122 68.9
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 9.4e-47 190.7 122 68.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 9.4e-47 190.7 121 68.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.2e-46 190.3 122 68.9
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-46 190.3 117 70.1
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-46 190.3 117 70.1
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.6e-46 189.9 122 68.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.6e-46 189.9 122 68.0
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.6e-46 189.9 122 68.0
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.6e-46 189.9 122 68.9
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.6e-46 189.9 122 67.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 2.1e-46 189.5 122 68.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 2.7e-46 189.1 146 61.6
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.7e-46 189.1 122 68.9
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 2.7e-46 189.1 122 68.9
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.7e-46 189.1 122 67.2
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.7e-46 189.1 122 67.2
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.6e-46 188.7 122 67.2
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 6.1e-46 188.0 122 66.4
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 6.1e-46 188.0 122 68.0
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 7.9e-46 187.6 122 67.2
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.0e-45 187.2 122 65.6
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.0e-45 187.2 122 67.2
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.0e-45 187.2 122 67.2
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.4e-45 186.8 122 64.8
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.4e-45 186.8 122 66.4
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 1.8e-45 186.4 122 68.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 3.0e-45 185.7 122 66.4
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 3.0e-45 185.7 122 67.2
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 6.7e-45 184.5 122 67.2
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 6.7e-45 184.5 122 67.2
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 8.8e-45 184.1 122 63.9
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 8.8e-45 184.1 122 66.4
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-44 183.7 122 68.9
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-44 183.7 122 68.9
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 1.5e-44 183.3 170 56.5
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 2.0e-44 183.0 122 65.6
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 2.0e-44 183.0 122 66.4
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 2.0e-44 183.0 122 64.8
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 2.6e-44 182.6 120 68.3
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 3.3e-44 182.2 122 68.9
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.3e-44 182.2 122 68.9
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.3e-44 182.2 122 68.9
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 4.4e-44 181.8 122 68.0
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 1.7e-43 179.9 122 64.8
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.8e-43 178.3 122 66.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.3e-43 177.9 134 59.0
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 6.3e-43 177.9 103 77.7
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 6.3e-43 177.9 129 62.0
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.1e-42 177.2 122 65.6
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 1.8e-42 176.4 122 63.9
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.4e-42 176.0 122 62.3
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 3.1e-42 175.6 122 63.9
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 4.1e-42 175.3 122 63.9
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.6e-41 173.3 122 64.8
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.6e-41 172.6 103 72.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 2.6e-41 172.6 122 63.1
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 3.5e-41 172.2 122 63.9
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 5.9e-41 171.4 122 64.8
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 7.7e-41 171.0 122 61.5
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.0e-40 170.6 122 63.1
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.3e-40 170.2 122 60.7
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 1.3e-40 170.2 126 61.1
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.9e-40 169.1 122 63.1
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 3.8e-40 168.7 122 58.2
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 5.0e-40 168.3 122 61.5
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 5.0e-40 168.3 122 63.9
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 6.5e-40 167.9 122 60.7
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.5e-40 167.5 103 70.9
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.1e-39 167.2 122 62.3
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.1e-39 167.2 122 61.5
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.5e-39 166.0 122 62.3
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 2.5e-39 166.0 122 62.3
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.2e-39 165.6 122 61.5
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.5e-39 164.9 103 70.9
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 9.4e-39 164.1 122 59.8
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 1.2e-38 163.7 122 59.8
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.7e-38 162.5 122 61.5
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 1.0e-37 160.6 105 67.6
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 1.8e-37 159.8 147 53.1
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 1.1e-36 157.1 169 47.9
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.6e-36 156.0 122 58.2
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.6e-36 156.0 201 41.8
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 7.5e-36 154.5 122 55.7
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 2.2e-35 152.9 120 55.8
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 1.4e-34 150.2 122 57.4
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.4e-34 149.4 122 56.6
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 5.3e-34 148.3 122 55.7
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 3.5e-33 145.6 122 54.9
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 3.5e-33 145.6 122 54.9
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.7e-32 143.3 122 54.1
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 2.9e-32 142.5 108 53.7
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 9.4e-31 137.5 122 54.1
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 9.4e-23 110.9 66 72.7
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.8e-21 106.7 108 52.8
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 5.2e-21 105.1 78 59.0
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 5.2e-21 105.1 78 59.0
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 5.9e-17 91.7 78 52.6
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.8e-16 89.0 78 51.3
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 5.0e-16 88.6 69 60.9
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.5e-15 86.3 52 69.2
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.6e-14 83.6 54 64.8
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.6e-14 83.6 54 64.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 4.7e-14 82.0 75 49.3
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 4.7e-14 82.0 75 49.3
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 8.3e-11 71.2 45 71.1
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 5.4e-10 68.6 40 72.5
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.2e-09 67.4 44 65.9
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 4.6e-09 65.5 62 48.4
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 1.0e-08 64.3 48 62.5
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 2.3e-08 63.2 69 42.0


User provided reference genes

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