Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 0.0e+00 1095.5 588 100.0
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.4e-137 494.2 585 57.6
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 5.4e-73 279.6 575 40.0
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 3.5e-56 223.8 154 74.0
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 4.2e-25 120.6 151 48.3
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 5.5e-25 120.2 149 46.3
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 7.1e-25 119.8 150 46.0
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 7.1e-25 119.8 197 40.6
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 9.3e-25 119.4 138 47.8
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 2.1e-24 118.2 150 49.3
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 2.7e-24 117.9 170 44.1
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 6.0e-24 116.7 135 47.4
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 6.0e-24 116.7 169 45.0
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 7.9e-24 116.3 172 43.0
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 7.9e-24 116.3 172 43.6
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 2.3e-23 114.8 141 45.4
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 3.0e-23 114.4 106 50.9
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 5.1e-23 113.6 152 46.1
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 1.5e-22 112.1 158 45.6
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 1.9e-22 111.7 147 46.3
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 3.3e-22 110.9 147 45.6
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 4.3e-22 110.5 134 49.3
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 4.3e-22 110.5 122 46.7
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 7.4e-22 109.8 134 45.5
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 7.4e-22 109.8 153 45.1
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 7.4e-22 109.8 146 43.8
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 9.6e-22 109.4 189 40.7
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 9.6e-22 109.4 138 45.7
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.6e-22 109.4 144 44.4
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.6e-22 109.4 144 44.4
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 9.6e-22 109.4 152 42.1
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 9.6e-22 109.4 152 42.1
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.3e-21 109.0 132 48.5
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.3e-21 109.0 132 48.5
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.6e-21 108.6 134 46.3
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.1e-21 108.2 132 47.0
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 2.1e-21 108.2 120 48.3
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.7e-21 107.5 134 45.5
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 6.2e-21 106.7 308 32.8
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 6.2e-21 106.7 165 41.8
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 8.1e-21 106.3 140 41.4
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 8.1e-21 106.3 209 36.8
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 8.1e-21 106.3 147 43.5
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 1.1e-20 105.9 161 41.6
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.1e-20 105.9 137 45.3
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 1.1e-20 105.9 177 39.5
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.1e-20 105.9 132 43.9
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 1.4e-20 105.5 209 36.8
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 1.4e-20 105.5 181 37.6
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.8e-20 105.1 135 43.7
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 2.4e-20 104.8 137 45.3
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 2.4e-20 104.8 134 44.8
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.4e-20 104.8 134 44.8
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.4e-20 104.8 134 44.8
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.4e-20 104.8 132 46.2
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 3.1e-20 104.4 138 44.9
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 4.0e-20 104.0 139 44.6
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 4.0e-20 104.0 139 45.3
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 5.3e-20 103.6 149 44.3
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 6.9e-20 103.2 146 43.8
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 6.9e-20 103.2 134 46.3
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 9.0e-20 102.8 146 44.5
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 1.2e-19 102.4 235 37.0
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 1.2e-19 102.4 135 45.2
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 1.5e-19 102.1 137 45.3
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 2.0e-19 101.7 137 43.8
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.6e-19 101.3 134 44.0
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 2.6e-19 101.3 139 44.6
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 3.4e-19 100.9 106 50.0
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 3.4e-19 100.9 139 43.9
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 4.5e-19 100.5 138 43.5
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 7.6e-19 99.8 148 39.2
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 1.0e-18 99.4 164 40.2
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 1.3e-18 99.0 164 39.0
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 1.7e-18 98.6 159 39.0
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 2.2e-18 98.2 134 44.8
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 2.9e-18 97.8 135 43.7
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 6.5e-18 96.7 188 37.2
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 6.5e-18 96.7 139 43.9
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 8.4e-18 96.3 142 41.5
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.9e-17 95.1 179 39.1
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 1.9e-17 95.1 140 44.3
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 4.2e-17 94.0 109 45.9
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 5.5e-17 93.6 141 42.6
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 7.1e-17 93.2 139 42.4
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 7.1e-17 93.2 156 42.3
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 7.1e-17 93.2 135 43.0
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 1.2e-16 92.4 110 45.5
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 1.2e-16 92.4 146 41.8
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 2.7e-16 91.3 138 43.5
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 4.6e-16 90.5 135 43.7
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 7.9e-16 89.7 106 45.3
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.3e-15 89.0 124 44.4
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 3.0e-15 87.8 110 43.6
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 3.9e-15 87.4 92 54.3
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 5.1e-15 87.0 169 35.5
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.5e-14 85.5 106 45.3
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 2.5e-14 84.7 147 38.1
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 2.5e-14 84.7 147 38.1
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 3.3e-14 84.3 146 38.4
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 3.3e-14 84.3 103 41.7
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 4.3e-14 84.0 159 37.1
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 5.7e-14 83.6 106 44.3
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 5.7e-14 83.6 159 37.1
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 3.7e-13 80.9 125 41.6
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.1e-12 77.4 103 45.6
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.2e-11 75.9 113 39.8
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.2e-11 75.9 113 39.8
Pp3c11_23210 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.6e-11 74.7 269 34.9
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 7.6e-11 73.2 133 37.6
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 1.0e-10 72.8 134 39.6
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 5.0e-10 70.5 199 34.7
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 5.0e-10 70.5 209 32.5
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 6.5e-10 70.1 132 38.6
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 8.4e-10 69.7 199 34.2
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 1.9e-09 68.6 99 41.4
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 3.5e-08 64.3 59 50.8
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 6.1e-08 63.5 118 37.3


User provided reference genes

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