Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 4.0e-193 677.9 348 100.0
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 3.4e-51 206.5 203 54.2
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.1e-47 192.6 343 40.5
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.1e-47 192.6 343 40.5
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 4.1e-44 183.0 205 49.8
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 1.4e-33 147.9 204 44.1
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 1.3e-18 98.2 201 33.8
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 2.5e-17 94.0 203 33.5
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 2.7e-16 90.5 217 31.3
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 4.7e-16 89.7 232 29.3
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 6.1e-16 89.4 216 32.4
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 8.0e-16 89.0 199 34.2
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.8e-15 87.8 208 33.2
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 2.3e-15 87.4 198 33.3
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 3.0e-15 87.0 203 32.5
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 4.0e-15 86.7 208 29.3
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 4.0e-15 86.7 198 30.8
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 6.7e-15 85.9 200 30.0
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 8.8e-15 85.5 212 28.3
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 8.8e-15 85.5 199 32.2
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 1.2e-14 85.1 200 30.5
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.5e-14 84.7 200 32.5
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 7.5e-14 82.4 200 32.5
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 1.3e-13 81.6 200 32.0
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.8e-13 80.5 200 31.5
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 3.7e-13 80.1 199 30.7
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 4.8e-13 79.7 198 30.8
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.1e-12 78.6 201 29.9
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 1.8e-12 77.8 202 32.2
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 2.4e-12 77.4 205 29.3
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 4.1e-12 76.6 218 30.3
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 4.1e-12 76.6 199 31.2
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 9.1e-12 75.5 247 30.4
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.6e-11 74.7 216 28.2
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.6e-11 74.7 203 29.1
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 2.0e-11 74.3 235 25.1
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.3e-10 71.6 220 26.4
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.7e-10 71.2 203 29.6
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 2.2e-10 70.9 200 25.5
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 2.9e-10 70.5 203 30.5
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 3.8e-10 70.1 201 27.9
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 3.8e-10 70.1 231 24.7
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 6.5e-10 69.3 203 29.1
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 8.5e-10 68.9 223 29.1
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.5e-09 68.2 207 30.4
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 1.9e-09 67.8 202 27.7
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.9e-09 67.8 200 27.5
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 4.2e-09 66.6 210 27.1
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 4.2e-09 66.6 84 35.7
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 5.5e-09 66.2 203 27.1
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 5.5e-09 66.2 201 24.9
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 7.2e-09 65.9 104 31.7
Haze_01221 Corylus avellana HOM05D003060 ORTHO05D001716 1.6e-08 64.7 92 38.0
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 2.1e-08 64.3 81 35.8
HanXRQChr11g0339461 Helianthus annuus HOM05D003060 ORTHO05D001716 4.7e-08 63.2 89 38.2
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 4.7e-08 63.2 200 24.5
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 4.7e-08 63.2 151 26.5
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 6.1e-08 62.8 222 24.3
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 8.0e-08 62.4 202 26.2
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 1.8e-07 61.2 197 25.9
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 1.8e-07 61.2 198 26.3
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.3e-07 60.8 213 25.4
ECA132G0003 Erigeron canadensis HOM05D003060 ORTHO05D001716 2.3e-07 60.8 89 37.1
PSO063G5713 Papaver somniferum HOM05D003060 ORTHO05D001716 2.3e-07 60.8 89 38.2
PSO782G3873 Papaver somniferum HOM05D003060 ORTHO05D001716 2.3e-07 60.8 89 38.2
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 3.0e-07 60.5 143 29.4
AT2G31650 Arabidopsis thaliana HOM05D000590 ORTHO05D005739 4.0e-07 60.1 107 33.6
Ciclev10000070m.g Citrus clementina HOM05D003060 ORTHO05D001716 4.0e-07 60.1 89 36.0
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 5.2e-07 59.7 126 28.6
CSS0023112 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D001716 5.2e-07 59.7 76 39.5
Atru.chr4.2819 Acer truncatum HOM05D003060 ORTHO05D001716 6.8e-07 59.3 141 28.4
Lsat_1_v5_gn_9_87441 Lactuca sativa HOM05D003060 ORTHO05D001716 6.8e-07 59.3 89 36.0
AagrBONN_evm.TU.Sc2ySwM_344.772 Anthoceros agrestis HOM05D000590 ORTHO05D005739 1.2e-06 58.5 109 33.9
CARHR125280 Cardamine hirsuta HOM05D000590 ORTHO05D005739 1.2e-06 58.5 121 33.9
MD09G1031100 Malus domestica HOM05D000855 ORTHO05D001716 1.2e-06 58.5 120 32.5
Oeu029902.1 Olea europaea HOM05D000590 ORTHO05D005739 1.2e-06 58.5 116 28.4
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 1.5e-06 58.2 206 27.7
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.0e-06 57.8 139 24.5
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 2.0e-06 57.8 144 27.8
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 2.0e-06 57.8 124 29.8
TWI09G0082 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 2.0e-06 57.8 88 35.2
AL1G15760 Arabidopsis lyrata HOM05D000590 ORTHO05D005739 2.6e-06 57.4 127 31.5
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 2.6e-06 57.4 198 26.3
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 2.6e-06 57.4 235 26.4
Prupe.3G286500 Prunus persica HOM05D000855 ORTHO05D001716 2.6e-06 57.4 96 35.4
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.6e-06 57.4 200 26.0
AL4G26890 Arabidopsis lyrata HOM05D000590 ORTHO05D005739 3.4e-06 57.0 107 32.7
Lalb_Chr18g0045701 Lupinus albus HOM05D003060 ORTHO05D001716 3.4e-06 57.0 92 34.8
Psat6g150120 Pisum sativum HOM05D003060 ORTHO05D001716 3.4e-06 57.0 89 33.7
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 3.4e-06 57.0 102 29.4
Sp4g14050 Schrenkiella parvula HOM05D000590 ORTHO05D005739 3.4e-06 57.0 125 29.6
GSVIVG01032455001 Vitis vinifera HOM05D000855 ORTHO05D001716 3.4e-06 57.0 90 35.6
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 5.7e-06 56.2 96 33.3
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 5.7e-06 56.2 232 23.3
Thhalv10016217m.g Eutrema salsugineum HOM05D000590 ORTHO05D005739 5.7e-06 56.2 107 32.7
Carub.0004s1295 Capsella rubella HOM05D000590 ORTHO05D005739 7.5e-06 55.8 117 31.6
Actinidia40264 Actinidia chinensis HOM05D003060 ORTHO05D001716 9.8e-06 55.5 82 31.7
Haze_04161 Corylus avellana HOM05D003060 ORTHO05D001716 9.8e-06 55.5 87 35.6
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 9.8e-06 55.5 197 24.4


User provided reference genes

Program Settings