Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0122 Marchantia polymorpha HOM05D010122 ORTHO05D013334 6.6e-60 233.8 115 100.0
Mapoly0180s0018 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.3e-28 129.8 117 56.4
Mapoly0180s0014 Marchantia polymorpha HOM05D010122 ORTHO05D013334 3.9e-28 128.3 117 55.6
Mapoly0180s0021 Marchantia polymorpha HOM05D010122 ORTHO05D013334 5.1e-28 127.9 117 54.7
Mapoly0180s0019 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.9e-27 125.9 117 53.0
Mapoly0180s0012 Marchantia polymorpha HOM05D010122 ORTHO05D013334 2.5e-27 125.6 117 53.8
Mapoly0180s0015 Marchantia polymorpha HOM05D010122 ORTHO05D013334 2.2e-23 112.5 118 50.0
Mapoly0180s0017 Marchantia polymorpha HOM05D010122 ORTHO05D013334 2.2e-23 112.5 118 50.0
Mapoly0026s0123 Marchantia polymorpha HOM05D010122 ORTHO05D013334 4.2e-22 108.2 152 39.5
Mapoly0014s0008 Marchantia polymorpha HOM05D010122 ORTHO05D013334 8.2e-18 94.0 99 45.5
Mapoly0014s0014 Marchantia polymorpha HOM05D010122 ORTHO05D013334 8.2e-18 94.0 99 45.5
Mapoly0983s0001 Marchantia polymorpha HOM05D010122 ORTHO05D017075 2.0e-16 89.4 112 42.0
Mapoly0028s0146 Marchantia polymorpha HOM05D010122 ORTHO05D013334 6.1e-13 77.8 65 55.4
Mapoly0023s0034 Marchantia polymorpha HOM05D000262 ORTHO05D000399 2.4e-09 65.9 65 40.0
Mapoly0026s0124 Marchantia polymorpha HOM05D010122 ORTHO05D013334 3.1e-09 65.5 92 39.1
Pp3c25_11290 Physcomitrium patens HOM05D011764 ORTHO05D017075 2.0e-08 62.8 100 34.0
Pp3c19_4310 Physcomitrium patens HOM05D000262 ORTHO05D000300 2.6e-08 62.4 67 43.3
Pp3c19_4313 Physcomitrium patens HOM05D000262 ORTHO05D000300 2.6e-08 62.4 67 43.3
Mapoly0025s0037 Marchantia polymorpha HOM05D025773 ORTHO05D000300 1.3e-07 60.1 63 41.3
CAN.G11.13 Capsicum annuum HOM05D000262 ORTHO05D000300 2.2e-07 59.3 66 43.9
Mapoly0022s0174 Marchantia polymorpha HOM05D025773 ORTHO05D000300 2.9e-07 58.9 117 30.8
Pp3c20_18320 Physcomitrium patens HOM05D011764 ORTHO05D308574 3.8e-07 58.5 63 41.3
Pp3c6_12850 Physcomitrium patens HOM05D015359 ORTHO05D050340 3.8e-07 58.5 67 40.3
CAN.G3888.1 Capsicum annuum HOM05D000262 ORTHO05D000300 5.0e-07 58.2 63 44.4
Glyma.18G019300 Glycine max HOM05D000262 ORTHO05D000300 6.5e-07 57.8 63 46.0
Solyc03g043640.3 Solanum lycopersicum HOM05D000262 ORTHO05D000300 6.5e-07 57.8 63 41.3
Sopen03g007490 Solanum pennellii HOM05D000262 ORTHO05D000300 6.5e-07 57.8 63 41.3
PGSC0003DMG400016689 Solanum tuberosum HOM05D000262 ORTHO05D000300 6.5e-07 57.8 63 41.3
Mapoly0025s0091 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.1e-06 57.0 79 36.7
Lalb_Chr11g0075231 Lupinus albus HOM05D000262 ORTHO05D000300 1.4e-06 56.6 64 45.3
Pp3c18_18100 Physcomitrium patens HOM05D000262 ORTHO05D000300 1.4e-06 56.6 75 37.3
Pp3c24_5200 Physcomitrium patens HOM05D011764 ORTHO05D318183 1.9e-06 56.2 63 41.3
Ca_17711_v3 Cicer arietinum L. HOM05D000262 ORTHO05D000300 2.5e-06 55.8 72 40.3
Glyma.11G238000 Glycine max HOM05D000262 ORTHO05D000300 2.5e-06 55.8 63 44.4
Lj4g0003851 Lotus japonicus HOM05D000262 ORTHO05D000300 2.5e-06 55.8 63 46.0
Lalb_Chr07g0184961 Lupinus albus HOM05D000262 ORTHO05D000300 2.5e-06 55.8 72 40.3
Mapoly0040s0108 Marchantia polymorpha HOM05D033683 ORTHO05D030131 2.5e-06 55.8 71 39.4
Oeu054755.1 Olea europaea HOM05D000262 ORTHO05D000300 2.5e-06 55.8 63 42.9
TPR.G2225 Trifolium pratense HOM05D000262 ORTHO05D000300 2.5e-06 55.8 63 46.0
FAN19G2706 Fragaria x ananassa HOM05D000262 ORTHO05D000300 3.2e-06 55.5 63 46.0
FAN23G0489 Fragaria x ananassa HOM05D000262 ORTHO05D000300 3.2e-06 55.5 63 46.0
FAN26G0693 Fragaria x ananassa HOM05D000262 ORTHO05D000300 3.2e-06 55.5 63 46.0
FAN28G1131 Fragaria x ananassa HOM05D000262 ORTHO05D000300 3.2e-06 55.5 63 46.0
RcHm_v2.0_Chr2g0115511 Rosa chinensis HOM05D000262 ORTHO05D000300 3.2e-06 55.5 63 46.0
Solyc04g054500.3 Solanum lycopersicum HOM05D000262 ORTHO05D000300 3.2e-06 55.5 80 40.0
Sopen04g024320 Solanum pennellii HOM05D000262 ORTHO05D000300 3.2e-06 55.5 80 40.0
Cpa.g.c31205 Carica papaya HOM05D000262 ORTHO05D000300 4.2e-06 55.1 76 35.5
ECA246G1406 Erigeron canadensis HOM05D000262 ORTHO05D000300 4.2e-06 55.1 63 41.3
Lalb_Chr12g0203661 Lupinus albus HOM05D000262 ORTHO05D000300 4.2e-06 55.1 63 44.4
Psat7g053160 Pisum sativum HOM05D000262 ORTHO05D000300 4.2e-06 55.1 72 40.3
BcaNung00892 Brassica carinata HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
BcaNung05546 Brassica carinata HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
A01p00590 Brassica napus HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
C01p00720 Brassica napus HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
BolC1t00075H Brassica oleracea HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
BraA01t00067Z Brassica rapa HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
CiPaw.04G095500 Carya illinoinensis HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
Mapoly0022s0176 Marchantia polymorpha HOM05D025773 ORTHO05D000300 5.5e-06 54.7 114 30.7
Mapoly0063s0004 Marchantia polymorpha HOM05D033683 ORTHO05D005718 5.5e-06 54.7 68 38.2
Phvul.001G250300 Phaseolus vulgaris HOM05D000262 ORTHO05D000300 5.5e-06 54.7 63 44.4
arahy.Tifrunner.gnm1.ann1.V8TWEN Arachis hypogaea HOM05D000262 ORTHO05D000300 7.2e-06 54.3 63 46.0
MSTRG.9104 Avicennia marina HOM05D000262 ORTHO05D000399 7.2e-06 54.3 67 40.3
BolC2t06159H Brassica oleracea HOM05D000262 ORTHO05D000399 7.2e-06 54.3 73 38.4
Pp3c5_14790 Physcomitrium patens HOM05D014505 ORTHO05D050340 7.2e-06 54.3 62 37.1
Sp7g36190 Schrenkiella parvula HOM05D000262 ORTHO05D000300 7.2e-06 54.3 63 42.9
MSTRG.20431 Avicennia marina HOM05D000520 ORTHO05D000399 9.4e-06 53.9 72 40.3
FvH4_1g21640 Fragaria vesca HOM05D000262 ORTHO05D000300 9.4e-06 53.9 63 44.4
HanXRQChr12g0375901 Helianthus annuus HOM05D000262 ORTHO05D000300 9.4e-06 53.9 63 39.7
Manes.01G115000 Manihot esculenta HOM05D000262 ORTHO05D000300 9.4e-06 53.9 88 31.8
Pp3c3_8280 Physcomitrium patens HOM05D010122 ORTHO05D013334 9.4e-06 53.9 69 39.1
PGSC0003DMG400012592 Solanum tuberosum HOM05D000999 ORTHO05D000961 9.4e-06 53.9 76 42.1


User provided reference genes

Program Settings