Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 5.1e-42 174.9 160 100.0
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 3.5e-11 72.4 59 55.9
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.1e-09 67.4 59 55.9
Pp3c2_27120 Physcomitrium patens HOM05D007144 ORTHO05D008709 1.5e-09 67.0 63 55.6
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 1.9e-09 66.6 57 56.1
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 2.5e-09 66.2 51 58.8
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.5e-09 66.2 65 53.8
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 3.3e-09 65.9 54 50.0
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 3.3e-09 65.9 48 56.2
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 3.3e-09 65.9 53 54.7
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 4.3e-09 65.5 52 55.8
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 4.3e-09 65.5 59 52.5
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 4.3e-09 65.5 52 53.8
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 4.3e-09 65.5 52 53.8
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 4.3e-09 65.5 52 53.8
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 4.3e-09 65.5 59 54.2
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 4.3e-09 65.5 49 59.2
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 4.3e-09 65.5 54 51.9
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 7.4e-09 64.7 48 56.2
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 7.4e-09 64.7 48 60.4
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 7.4e-09 64.7 58 53.4
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 7.4e-09 64.7 56 57.1
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 9.7e-09 64.3 50 60.0
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 9.7e-09 64.3 52 53.8
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 9.7e-09 64.3 49 59.2
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.3e-08 63.9 48 60.4
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 1.3e-08 63.9 58 53.4
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 1.3e-08 63.9 58 53.4
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 1.6e-08 63.5 48 60.4
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 1.6e-08 63.5 50 54.0
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.6e-08 63.5 42 66.7
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 1.6e-08 63.5 50 54.0
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 2.2e-08 63.2 50 56.0
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 2.2e-08 63.2 56 51.8
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 2.2e-08 63.2 53 56.6
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 2.2e-08 63.2 54 53.7
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 2.8e-08 62.8 48 54.2
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.8e-08 62.8 54 55.6
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.8e-08 62.8 65 52.3
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 2.8e-08 62.8 65 52.3
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 2.8e-08 62.8 49 57.1
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.8e-08 62.8 50 58.0
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 3.7e-08 62.4 58 51.7
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 3.7e-08 62.4 54 53.7
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 3.7e-08 62.4 49 57.1
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 3.7e-08 62.4 48 58.3
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 3.7e-08 62.4 59 49.2
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 4.8e-08 62.0 60 50.0
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 4.8e-08 62.0 60 50.0
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 4.8e-08 62.0 60 50.0
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 4.8e-08 62.0 56 51.8
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 6.3e-08 61.6 50 52.0
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 6.3e-08 61.6 41 68.3
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 8.2e-08 61.2 61 45.9
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 8.2e-08 61.2 61 45.9
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 8.2e-08 61.2 61 45.9
Cre12.g484500 Chlamydomonas reinhardtii HOM05D007144 ORTHO05D008709 8.2e-08 61.2 57 50.9
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 8.2e-08 61.2 48 56.2
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 8.2e-08 61.2 47 59.6
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 8.2e-08 61.2 58 51.7
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 8.2e-08 61.2 48 58.3
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 1.1e-07 60.8 48 54.2
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 1.1e-07 60.8 48 56.2
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 1.1e-07 60.8 54 50.0
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 1.1e-07 60.8 48 52.1
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 1.1e-07 60.8 48 58.3
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.1e-07 60.8 49 55.1
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 1.4e-07 60.5 50 58.0
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.4e-07 60.5 47 57.4
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.4e-07 60.5 65 50.8
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 1.4e-07 60.5 48 58.3
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.8e-07 60.1 50 54.0
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.8e-07 60.1 50 56.0
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 2.4e-07 59.7 49 53.1
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 2.4e-07 59.7 54 50.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 3.1e-07 59.3 49 49.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 3.1e-07 59.3 54 51.9
PRCOL_00000160 Prasinoderma coloniale HOM05D007144 ORTHO05D008709 3.1e-07 59.3 62 51.6
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 3.1e-07 59.3 62 46.8
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 4.1e-07 58.9 48 58.3
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 4.1e-07 58.9 48 56.2
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 5.3e-07 58.5 54 51.9
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 5.3e-07 58.5 48 54.2
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 5.3e-07 58.5 50 50.0
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 6.9e-07 58.2 50 48.0
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 6.9e-07 58.2 47 53.2
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 9.0e-07 57.8 54 51.9
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 1.2e-06 57.4 50 56.0
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 3.4e-06 55.8 50 50.0
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 4.5e-06 55.5 48 50.0
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.0e-05 54.3 46 56.5
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 1.0e-05 54.3 50 54.0
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 1.0e-05 54.3 54 48.1


User provided reference genes

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