Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 1.6e-180 636.0 321 100.0
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 2.7e-74 283.1 326 43.6
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 3.5e-74 282.7 293 49.5
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.2e-73 280.0 297 46.8
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.2e-73 280.0 297 47.1
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.2e-73 280.0 297 47.1
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 2.9e-73 279.6 293 49.1
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 6.5e-73 278.5 293 49.1
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 1.1e-72 277.7 292 49.0
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.5e-72 277.3 294 46.9
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 4.2e-72 275.8 293 47.8
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 5.5e-72 275.4 296 48.6
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.2e-71 274.2 290 45.9
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.6e-71 273.9 293 48.5
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 2.7e-71 273.1 294 46.9
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 3.6e-71 272.7 293 46.1
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 6.1e-71 271.9 293 48.1
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 8.0e-71 271.6 292 48.6
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 1.4e-70 270.8 296 47.0
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.8e-70 270.4 292 48.6
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 1.8e-70 270.4 294 47.6
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 4.0e-70 269.2 298 45.6
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 4.0e-70 269.2 314 43.3
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 4.0e-70 269.2 292 46.6
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 6.8e-70 268.5 294 47.6
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 6.8e-70 268.5 297 46.1
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 8.8e-70 268.1 294 45.9
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 1.2e-69 267.7 292 45.5
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.2e-69 267.7 293 45.1
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.5e-69 267.3 292 46.9
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.0e-69 266.9 295 47.5
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.6e-69 266.5 292 47.6
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 4.4e-69 265.8 292 46.6
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 4.4e-69 265.8 292 45.9
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 4.4e-69 265.8 296 45.6
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 5.7e-69 265.4 294 44.6
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 7.5e-69 265.0 292 45.5
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 9.8e-69 264.6 295 45.1
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 1.3e-68 264.2 292 45.5
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 1.3e-68 264.2 294 46.6
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 1.7e-68 263.8 295 45.1
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 2.2e-68 263.5 297 46.5
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.8e-68 263.1 296 46.6
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 2.8e-68 263.1 293 44.4
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 2.8e-68 263.1 293 44.7
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 4.8e-68 262.3 295 46.1
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 4.8e-68 262.3 296 44.3
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 6.3e-68 261.9 295 46.8
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 8.3e-68 261.5 292 45.5
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 1.1e-67 261.2 309 45.0
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.1e-67 261.2 295 45.8
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.4e-67 260.8 294 45.6
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.4e-67 260.8 291 47.1
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 3.1e-67 259.6 292 47.3
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 5.4e-67 258.8 297 45.5
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 7.0e-67 258.5 292 45.5
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 7.0e-67 258.5 295 45.1
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 9.1e-67 258.1 298 45.3
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 1.2e-66 257.7 291 46.7
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 2.7e-66 256.5 292 44.2
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 4.5e-66 255.8 314 43.3
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 1.3e-65 254.2 277 45.8
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 5.0e-65 252.3 297 45.8
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 8.6e-65 251.5 294 45.6
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 4.2e-64 249.2 296 44.3
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 5.5e-64 248.8 295 43.4
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.6e-63 247.3 319 44.2
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 2.1e-63 246.9 310 41.9
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 6.1e-63 245.4 293 42.7
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 1.4e-62 244.2 292 45.5
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 6.8e-62 241.9 300 42.0
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 3.4e-61 239.6 298 43.3
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 1.7e-60 237.3 258 46.9
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 3.7e-60 236.1 330 40.6
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 5.4e-59 232.3 365 37.3
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 2.0e-58 230.3 302 41.7
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 3.5e-58 229.6 257 43.6
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 5.9e-58 228.8 269 43.5
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 2.3e-57 226.9 272 41.5
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 5.6e-56 222.2 284 43.0
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 1.2e-55 221.1 292 43.8
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 2.8e-55 219.9 297 41.8
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 7.5e-53 211.8 244 45.1
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.3e-52 211.1 302 39.4
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 8.3e-52 208.4 232 46.1
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.7e-49 200.7 200 46.5
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 5.0e-49 199.1 201 50.2
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 8.6e-49 198.4 280 41.1
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.5e-48 197.6 198 46.0
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 1.9e-48 197.2 216 46.8
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 5.6e-48 195.7 308 37.3
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 9.5e-48 194.9 211 45.0
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 3.6e-47 193.0 228 44.3
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 8.0e-47 191.8 199 47.2
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 6.8e-46 188.7 171 54.4
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 9.8e-45 184.9 209 45.0
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 2.9e-44 183.3 286 37.4
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.1e-42 177.2 254 39.0
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-38 164.9 185 44.3
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 1.5e-37 161.0 204 42.6
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 3.4e-37 159.8 209 45.0
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 1.3e-36 157.9 175 45.1
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 4.1e-35 152.9 303 34.3
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 1.7e-33 147.5 183 43.7
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 1.6e-31 141.0 292 32.5
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.6e-31 139.8 170 42.4
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 2.7e-26 123.6 120 45.0
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 4.6e-26 122.9 135 47.4
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 3.1e-22 110.2 132 46.2
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.7e-18 97.1 171 36.3
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 1.7e-17 94.4 93 52.7
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 6.6e-17 92.4 99 43.4
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.9e-16 90.9 182 29.7
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 5.6e-16 89.4 102 46.1
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 9.6e-16 88.6 92 47.8
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 1.3e-15 88.2 105 46.7
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 3.1e-14 83.6 87 44.8
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 9.0e-14 82.0 151 35.1
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.0e-13 80.9 88 51.1
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 4.5e-13 79.7 128 38.3
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.4e-11 73.9 108 40.7
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 2.7e-10 70.5 94 44.7
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.5e-10 70.1 78 42.3
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.0e-09 68.6 92 42.4
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.0e-09 68.6 63 52.4
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 3.9e-09 66.6 67 47.8
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 5.1e-09 66.2 52 55.8
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.1e-08 65.1 79 43.0
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 6.9e-06 55.8 52 50.0


User provided reference genes

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