Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0029 Marchantia polymorpha HOM05D018826 ORTHO05D019645 0.0e+00 1464.9 776 100.0
Pp3c25_14770 Physcomitrium patens HOM05D018826 ORTHO05D019645 6.5e-143 512.3 759 42.3
AagrBONN_evm.TU.Sc2ySwM_340.473 Anthoceros agrestis HOM05D018826 ORTHO05D019645 2.3e-119 434.1 715 39.4
CBR_g30698 Chara braunii HOM05D018826 ORTHO05D019645 2.6e-91 340.9 858 32.8
Cre07.g357950 Chlamydomonas reinhardtii HOM05D018826 ORTHO05D019645 1.4e-33 149.1 679 27.0
PRCOL_00003134 Prasinoderma coloniale HOM05D018826 ORTHO05D019645 3.7e-29 134.4 249 37.3
SMO367G0599 Selaginella moellendorffii HOM05D018826 ORTHO05D019645 6.3e-21 107.1 207 34.8
EL10Ac5g10456 Beta vulgaris HOM05D001789 ORTHO05D001755 2.2e-10 72.0 263 28.1
Cre16.g662951 Chlamydomonas reinhardtii HOM05D013933 ORTHO05D015601 3.8e-10 71.2 212 31.1
Rhsim11G0128100 Rhododendron simsii HOM05D000413 ORTHO05D000292 3.6e-08 64.7 208 28.4
Prupe.1G160000 Prunus persica HOM05D000097 ORTHO05D000041 1.4e-07 62.8 125 32.8
Cre08.g383550 Chlamydomonas reinhardtii HOM05D012990 ORTHO05D002173 1.8e-07 62.4 203 29.6
COL.COLO4_14688 Corchorus olitorius HOM05D000264 ORTHO05D000152 1.8e-07 62.4 197 29.4
Thecc.02G088700 Theobroma cacao HOM05D000413 ORTHO05D000292 1.8e-07 62.4 269 26.8
Cc02_g22710 Coffea canephora HOM05D000413 ORTHO05D000292 4.0e-07 61.2 237 26.6
ATR1089G127 Amborella trichopoda HOM05D000413 ORTHO05D000292 5.2e-07 60.8 198 28.3
Manes.10G122000 Manihot esculenta HOM05D000413 ORTHO05D000292 6.8e-07 60.5 282 24.8
GSVIVG01003111001 Vitis vinifera HOM05D000097 ORTHO05D000041 6.8e-07 60.5 156 30.1
HanXRQChr16g0513861 Helianthus annuus HOM05D000413 ORTHO05D000292 8.8e-07 60.1 223 27.8
Gorai.012G178200 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.2e-06 59.7 171 33.3
Gohir.D04G184500 Gossypium hirsutum HOM05D000264 ORTHO05D000152 2.0e-06 58.9 171 32.7
Cpa.g.sc171.35 Carica papaya HOM05D002893 ORTHO05D003387 3.4e-06 58.2 170 27.6
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.4e-06 58.2 213 29.6
SEGI_12070 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 3.4e-06 58.2 227 29.1
SEGI_26100 Sequoiadendron giganteum HOM05D008476 ORTHO05D000152 3.4e-06 58.2 210 28.6
PGSC0003DMG400024168 Solanum tuberosum HOM05D000413 ORTHO05D000292 3.4e-06 58.2 186 28.0
CAN.G1441.3 Capsicum annuum HOM05D000413 ORTHO05D000292 4.4e-06 57.8 265 24.9
Cfa005503 Carpinus fangiana HOM05D000413 ORTHO05D000292 4.4e-06 57.8 191 28.8
Manes.07G018900 Manihot esculenta HOM05D000413 ORTHO05D000292 4.4e-06 57.8 226 27.0
Peaxi162Scf00003g03944 Petunia axillaris HOM05D000413 ORTHO05D000292 4.4e-06 57.8 202 25.7
Lj5A330T28 Lonicera japonica HOM05D000264 ORTHO05D000152 5.7e-06 57.4 232 26.7
Gohir.D02G214300 Gossypium hirsutum HOM05D000413 ORTHO05D000292 7.5e-06 57.0 200 29.0
Gorai.005G242200 Gossypium raimondii HOM05D000413 ORTHO05D000292 7.5e-06 57.0 200 29.0
QL02p099338 Quercus lobata HOM05D000413 ORTHO05D000292 7.5e-06 57.0 194 27.3
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 7.5e-06 57.0 276 26.4
Gohir.A03G193300 Gossypium hirsutum HOM05D000413 ORTHO05D000292 9.8e-06 56.6 200 29.0


User provided reference genes

Program Settings