Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 8.6e-125 450.3 219 100.0
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 3.1e-50 202.6 179 52.0
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 6.9e-50 201.4 177 53.7
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 1.2e-49 200.7 173 53.8
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 2.0e-49 199.9 174 54.0
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 1.0e-48 197.6 171 52.0
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 1.7e-48 196.8 175 50.3
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 1.7e-48 196.8 175 51.4
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 2.9e-48 196.1 175 50.9
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 2.9e-48 196.1 179 50.3
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 6.5e-48 194.9 189 47.6
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 6.5e-48 194.9 189 47.6
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.5e-48 194.9 175 50.3
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 6.5e-48 194.9 182 48.9
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 8.5e-48 194.5 182 48.4
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.1e-47 194.1 171 51.5
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 1.4e-47 193.7 178 51.1
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 1.9e-47 193.4 175 50.3
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 2.5e-47 193.0 177 49.2
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 5.5e-47 191.8 181 48.1
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 9.4e-47 191.0 179 48.0
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 1.2e-46 190.7 175 49.1
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 1.6e-46 190.3 171 50.9
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 2.1e-46 189.9 171 49.7
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 2.1e-46 189.9 178 50.0
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 2.7e-46 189.5 175 46.3
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 2.7e-46 189.5 171 49.7
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 2.7e-46 189.5 175 50.3
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 2.7e-46 189.5 175 49.1
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 3.6e-46 189.1 178 48.3
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 3.6e-46 189.1 182 48.4
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 3.6e-46 189.1 176 47.2
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 4.6e-46 188.7 176 51.1
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 4.6e-46 188.7 175 48.6
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 4.6e-46 188.7 175 47.4
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 6.1e-46 188.3 183 47.0
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 6.1e-46 188.3 175 49.7
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 7.9e-46 188.0 175 49.1
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 1.0e-45 187.6 175 47.4
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 1.4e-45 187.2 175 48.0
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.4e-45 187.2 171 49.1
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 1.4e-45 187.2 173 49.1
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 1.4e-45 187.2 175 48.6
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.3e-45 186.4 179 49.2
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 2.3e-45 186.4 176 47.7
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 2.3e-45 186.4 172 50.6
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 2.3e-45 186.4 172 50.6
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 3.0e-45 186.0 184 47.3
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 3.0e-45 186.0 170 50.6
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 3.9e-45 185.7 175 47.4
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.1e-45 185.3 164 50.6
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 6.7e-45 184.9 171 49.1
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 6.7e-45 184.9 171 48.5
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 8.8e-45 184.5 171 48.5
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 8.8e-45 184.5 181 45.3
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.1e-44 184.1 171 48.5
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 1.1e-44 184.1 175 46.3
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 1.1e-44 184.1 174 47.7
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 1.1e-44 184.1 171 47.4
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 1.5e-44 183.7 171 49.1
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 1.5e-44 183.7 171 48.5
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 2.0e-44 183.3 171 47.4
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 2.6e-44 183.0 198 42.9
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 3.3e-44 182.6 176 48.3
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 3.3e-44 182.6 172 50.6
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 3.3e-44 182.6 179 48.0
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 4.4e-44 182.2 175 49.1
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 5.7e-44 181.8 177 44.6
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 5.7e-44 181.8 166 52.4
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 7.4e-44 181.4 178 47.2
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 1.3e-43 180.6 147 55.1
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 1.7e-43 180.3 171 49.1
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 1.7e-43 180.3 173 49.1
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 1.7e-43 180.3 170 48.2
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 1.7e-43 180.3 171 48.5
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 1.7e-43 180.3 171 48.0
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 1.7e-43 180.3 175 46.3
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 2.2e-43 179.9 178 46.6
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 2.2e-43 179.9 175 47.4
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 2.8e-43 179.5 175 46.9
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 3.7e-43 179.1 172 49.4
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 3.7e-43 179.1 160 51.9
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 3.7e-43 179.1 183 44.3
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 4.8e-43 178.7 177 46.3
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 4.8e-43 178.7 171 48.0
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 1.4e-42 177.2 175 46.3
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 1.8e-42 176.8 170 48.2
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 1.8e-42 176.8 176 46.6
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 1.8e-42 176.8 171 47.4
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 1.8e-42 176.8 176 47.7
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 1.8e-42 176.8 175 46.3
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 2.4e-42 176.4 171 46.8
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 3.1e-42 176.0 160 51.2
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 4.1e-42 175.6 172 48.8
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 4.1e-42 175.6 171 45.6
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 6.9e-42 174.9 171 48.5
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 9.1e-42 174.5 147 51.0
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 9.1e-42 174.5 140 55.0
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 7.7e-41 171.4 159 49.7
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 2.2e-40 169.9 174 47.7
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 9.4e-39 164.5 177 45.2
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 7.4e-36 154.8 149 46.3
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.7e-35 153.7 166 42.8
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 4.1e-34 149.1 184 43.5
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 5.3e-34 148.7 170 42.9
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 9.1e-34 147.9 152 44.1
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 9.1e-34 147.9 154 44.2
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 6.5e-32 141.7 152 42.1
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 5.5e-31 138.7 148 41.2
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 6.7e-29 131.7 129 45.0
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.2e-28 131.0 135 47.4
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 9.7e-28 127.9 133 42.9
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 2.3e-21 106.7 193 35.8
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.8e-21 105.1 127 44.1
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 5.0e-16 89.0 171 35.7
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 1.8e-10 70.5 62 51.6
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.3e-08 64.3 58 44.8
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.3e-08 63.5 181 28.7
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 2.3e-08 63.5 181 28.2
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 2.9e-08 63.2 183 27.3
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 3.8e-08 62.8 181 28.7
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 3.8e-08 62.8 179 26.8
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 5.0e-08 62.4 181 27.6
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 6.6e-08 62.0 181 27.6
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 8.6e-08 61.6 182 28.0
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 1.1e-07 61.2 90 38.9
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.1e-07 61.2 180 27.8
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.5e-07 60.1 176 29.0
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 4.3e-07 59.3 175 27.4
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 4.3e-07 59.3 175 27.4
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 4.3e-07 59.3 175 27.4
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 4.3e-07 59.3 179 26.3
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 4.3e-07 59.3 151 30.5
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 5.6e-07 58.9 190 25.8
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 5.6e-07 58.9 183 26.2
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.3e-07 58.5 190 27.4
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 7.3e-07 58.5 179 27.9
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 9.5e-07 58.2 179 26.3
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 9.5e-07 58.2 179 26.3
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 9.5e-07 58.2 179 26.3
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 9.5e-07 58.2 170 28.2
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 9.5e-07 58.2 177 27.1
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.2e-06 57.8 177 26.6
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 1.2e-06 57.8 177 27.7
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.2e-06 57.8 173 26.0
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.1e-06 57.0 177 26.6
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 2.8e-06 56.6 185 25.9
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 2.8e-06 56.6 175 25.7
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 2.8e-06 56.6 177 26.0
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 3.6e-06 56.2 179 25.7
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 4.7e-06 55.8 178 27.0
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 4.7e-06 55.8 156 28.8
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 8.0e-06 55.1 198 25.8
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 8.0e-06 55.1 186 26.3


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