Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 1.4e-35 152.5 82 100.0
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.9e-17 90.9 66 75.8
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 2.5e-16 88.6 66 74.2
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.2e-15 86.3 64 76.6
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 1.3e-14 82.8 67 70.1
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 2.3e-14 82.0 63 71.4
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.3e-14 82.0 66 69.7
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.3e-14 82.0 66 69.7
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.9e-14 81.3 68 69.1
AagrBONN_evm.TU.Sc2ySwM_117.1875 Anthoceros agrestis HOM05D003549 ORTHO05D004223 5.1e-14 80.9 62 69.4
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 5.1e-14 80.9 66 68.2
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 1.1e-13 79.7 66 68.2
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 2.5e-13 78.6 63 69.8
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 7.4e-13 77.0 67 68.7
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 9.6e-13 76.6 67 68.7
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 9.6e-13 76.6 70 68.6
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 9.6e-13 76.6 76 64.5
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 1.6e-12 75.9 64 68.8
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 1.6e-12 75.9 64 68.8
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 1.6e-12 75.9 64 68.8
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 2.8e-12 75.1 67 64.2
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 3.7e-12 74.7 69 69.6
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 6.2e-12 73.9 66 66.7
CBR_g8660 Chara braunii HOM05D003549 ORTHO05D004223 8.2e-12 73.6 69 56.5
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 8.2e-12 73.6 66 66.7
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.1e-11 73.2 69 68.1
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.1e-11 73.2 66 63.6
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 2.4e-11 72.0 68 63.2
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 2.4e-11 72.0 68 63.2
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 3.1e-11 71.6 66 63.6
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 3.1e-11 71.6 68 64.7
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 4.0e-11 71.2 66 63.6
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 4.0e-11 71.2 64 67.2
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 4.0e-11 71.2 66 65.2
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 5.3e-11 70.9 72 63.9
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 5.3e-11 70.9 66 63.6
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 6.9e-11 70.5 66 65.2
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 6.9e-11 70.5 66 63.6
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 6.9e-11 70.5 67 64.2
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 9.0e-11 70.1 66 62.1
BolC2t09796H Brassica oleracea HOM05D003549 ORTHO05D004223 1.2e-10 69.7 68 64.7
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 1.5e-10 69.3 66 63.6
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.5e-10 69.3 65 61.5
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 2.0e-10 68.9 68 61.8
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 2.0e-10 68.9 63 65.1
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 2.6e-10 68.6 66 62.1
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 2.6e-10 68.6 66 62.1
Hma1.2p1_0967F.1_g242260 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 3.4e-10 68.2 79 53.2
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 4.5e-10 67.8 63 63.5
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 5.8e-10 67.4 63 65.1
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 5.8e-10 67.4 66 60.6
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 5.8e-10 67.4 78 59.0
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 5.8e-10 67.4 68 61.8
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 5.8e-10 67.4 66 62.1
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 5.8e-10 67.4 63 63.5
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 7.6e-10 67.0 75 57.3
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 1.7e-09 65.9 64 62.5
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 2.2e-09 65.5 67 61.2
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 2.9e-09 65.1 69 60.9
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 2.9e-09 65.1 66 59.1
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.8e-09 64.7 66 59.1
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.8e-09 64.7 66 59.1
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.8e-09 64.7 66 59.1
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 3.8e-09 64.7 71 59.2
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 5.0e-09 64.3 64 64.1
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 5.0e-09 64.3 64 64.1
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 5.0e-09 64.3 64 64.1
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 5.0e-09 64.3 64 64.1
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 6.5e-09 63.9 66 59.1
PRCOL_00000142 Prasinoderma coloniale HOM05D003549 ORTHO05D004223 6.5e-09 63.9 73 50.7
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 1.1e-08 63.2 66 62.1
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 1.1e-08 63.2 66 62.1
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 1.1e-08 63.2 66 59.1
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.1e-08 63.2 66 59.1
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.1e-08 63.2 69 62.3
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 1.9e-08 62.4 67 59.7
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 1.9e-08 62.4 66 60.6
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 3.2e-08 61.6 63 65.1
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 3.2e-08 61.6 68 58.8
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 4.2e-08 61.2 68 57.4
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 4.2e-08 61.2 63 57.1
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 5.5e-08 60.8 63 61.9
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 7.1e-08 60.5 64 59.4
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 9.3e-08 60.1 66 57.6
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 1.2e-07 59.7 64 59.4
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.6e-07 59.3 67 61.2
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 2.1e-07 58.9 68 60.3
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.1e-07 58.9 64 56.2
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.1e-07 58.9 64 57.8
Atru.chr9.2446 Acer truncatum HOM05D003549 ORTHO05D004223 2.7e-07 58.5 49 65.3
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.7e-07 58.5 66 59.1
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 2.7e-07 58.5 66 59.1
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.7e-07 58.5 66 59.1
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 2.7e-07 58.5 64 57.8
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 2.7e-07 58.5 67 56.7
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 3.5e-07 58.2 64 57.8
CDE05G3179 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 3.5e-07 58.2 69 52.2
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 3.5e-07 58.2 66 56.1
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 3.5e-07 58.2 66 56.1
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 3.5e-07 58.2 70 57.1
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 4.6e-07 57.8 68 58.8
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 4.6e-07 57.8 66 57.6
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 6.1e-07 57.4 65 60.0
MCO07G020 Micromonas commoda HOM05D003549 ORTHO05D004223 6.1e-07 57.4 61 55.7
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 6.1e-07 57.4 68 58.8
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 6.1e-07 57.4 67 58.2
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 7.9e-07 57.0 67 56.7
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.0e-06 56.6 67 55.2
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.0e-06 56.6 67 55.2
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.0e-06 56.6 67 55.2
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.0e-06 56.6 67 55.2
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 1.0e-06 56.6 66 54.5
CAN.G650.26 Capsicum annuum HOM05D003549 ORTHO05D004223 1.3e-06 56.2 50 62.0
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.3e-06 56.2 64 54.7
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 1.8e-06 55.8 76 50.0
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 1.8e-06 55.8 59 59.3
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 2.3e-06 55.5 66 57.6
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 2.3e-06 55.5 66 57.6
Eucgr.K02857 Eucalyptus grandis HOM05D003549 ORTHO05D004223 2.3e-06 55.5 66 57.6
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 3.9e-06 54.7 64 54.7
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 3.9e-06 54.7 71 52.1
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 3.9e-06 54.7 64 54.7
ATR0752G058 Amborella trichopoda HOM05D003549 ORTHO05D004223 5.1e-06 54.3 75 54.7
CAN.G208.13 Capsicum annuum HOM05D003549 ORTHO05D004223 5.1e-06 54.3 45 64.4
Manes.06G103400 Manihot esculenta HOM05D003549 ORTHO05D004223 5.1e-06 54.3 45 68.9
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 6.7e-06 53.9 63 55.6
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 8.7e-06 53.5 66 53.0
CARHR049490 Cardamine hirsuta HOM05D003549 ORTHO05D004223 8.7e-06 53.5 64 56.2
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 8.7e-06 53.5 67 53.7


User provided reference genes

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