Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0025s0069 Marchantia polymorpha HOM05D002201 ORTHO05D029957 3.9e-157 558.1 296 100.0
Mapoly0046s0118 Marchantia polymorpha HOM05D002201 ORTHO05D005125 1.8e-69 266.9 145 97.9
Pp3c23_21530 Physcomitrium patens HOM05D002201 ORTHO05D005125 4.2e-18 96.3 152 36.8
SEGI_06512 Sequoiadendron giganteum HOM05D002201 ORTHO05D005125 7.2e-18 95.5 193 34.7
AagrBONN_evm.TU.Sc2ySwM_362.1328 Anthoceros agrestis HOM05D002201 ORTHO05D005125 9.5e-18 95.1 174 35.6
AagrBONN_evm.TU.Sc2ySwM_368.1519 Anthoceros agrestis HOM05D002201 ORTHO05D005125 2.1e-17 94.0 174 36.2
ATR0680G150 Amborella trichopoda HOM05D002201 ORTHO05D005125 2.8e-17 93.6 184 38.6
AagrBONN_evm.TU.Sc2ySwM_368.893 Anthoceros agrestis HOM05D002201 ORTHO05D005125 3.0e-16 90.1 176 34.1
Eucgr.A02775 Eucalyptus grandis HOM05D002201 ORTHO05D005125 2.8e-14 83.6 163 34.4
Pp3c8_24320 Physcomitrium patens HOM05D002201 ORTHO05D005125 4.9e-14 82.8 141 33.3
Actinidia34127 Actinidia chinensis HOM05D002201 ORTHO05D005125 4.1e-13 79.7 171 32.2
Zm00001eb302790 Zea mays HOM05D001446 ORTHO05D029957 2.7e-12 77.0 76 51.3
DCAR_020255 Daucus carota HOM05D002201 ORTHO05D005125 2.9e-11 73.6 163 33.7
CAN.G1175.4 Capsicum annuum HOM05D002201 ORTHO05D005125 5.0e-11 72.8 170 35.3
Peaxi162Scf00444g00531 Petunia axillaris HOM05D002201 ORTHO05D005125 6.6e-11 72.4 168 34.5
Rhsim03G0187400 Rhododendron simsii HOM05D002201 ORTHO05D005125 8.6e-11 72.0 153 34.6
Actinidia25884 Actinidia chinensis HOM05D002201 ORTHO05D005125 1.9e-10 70.9 164 31.7
PGR042G1981 Punica granatum HOM05D002201 ORTHO05D005125 5.6e-10 69.3 167 35.3
Hund11737 Selenicereus undatus HOM05D002201 ORTHO05D005125 9.5e-10 68.6 179 32.4
Sp6g14630 Schrenkiella parvula HOM05D002201 ORTHO05D005125 2.1e-09 67.4 129 34.1
Carub.0008s1251 Capsella rubella HOM05D002201 ORTHO05D005125 2.8e-09 67.0 170 28.8
Dinv35222 Davidia involucrata HOM05D002201 ORTHO05D005125 2.8e-09 67.0 163 32.5
Zm00001eb133680 Zea mays HOM05D002201 ORTHO05D029957 2.8e-09 67.0 70 47.1
Zm00001eb065340 Zea mays HOM05D002201 ORTHO05D005125 3.6e-09 66.6 161 26.1
CiPaw.03G108200 Carya illinoinensis HOM05D002201 ORTHO05D005125 4.7e-09 66.2 149 32.9
Thhalv10012763m.g Eutrema salsugineum HOM05D002201 ORTHO05D005125 4.7e-09 66.2 128 33.6
Os03g0862100 Oryza sativa ssp. japonica HOM05D002201 ORTHO05D005125 4.7e-09 66.2 159 30.2
vmacro06662 Vaccinium macrocarpon HOM05D002201 ORTHO05D005125 4.7e-09 66.2 142 31.7
A02p11840 Brassica napus HOM05D002201 ORTHO05D005125 8.0e-09 65.5 159 30.2
Medtr6g053740 Medicago truncatula HOM05D002201 ORTHO05D005125 8.0e-09 65.5 162 32.1
Potri.012G142500 Populus trichocarpa HOM05D002201 ORTHO05D005125 8.0e-09 65.5 136 33.1
arahy.Tifrunner.gnm1.ann1.KSNA8H Arachis hypogaea HOM05D002201 ORTHO05D005125 1.4e-08 64.7 138 34.1
BraA02t06250Z Brassica rapa HOM05D002201 ORTHO05D005125 1.4e-08 64.7 129 32.6
Duzib068G1376 Durio zibethinus HOM05D002201 ORTHO05D005125 1.4e-08 64.7 163 27.6
ECA232G3432 Erigeron canadensis HOM05D002201 ORTHO05D005125 1.4e-08 64.7 163 30.7
CDE11G0772 Ceratophyllum demersum HOM05D002201 ORTHO05D005125 3.0e-08 63.5 165 34.5
Nn6g33438 Nelumbo nucifera HOM05D002201 ORTHO05D005125 3.0e-08 63.5 153 34.0
BcaC03g14534 Brassica carinata HOM05D002201 ORTHO05D005125 4.0e-08 63.2 160 29.4
Cfa023192 Carpinus fangiana HOM05D002201 ORTHO05D005125 4.0e-08 63.2 148 32.4
Ca_14551_v3 Cicer arietinum L. HOM05D002201 ORTHO05D005125 4.0e-08 63.2 142 31.0
Ca_30409_v3 Cicer arietinum L. HOM05D002201 ORTHO05D005125 4.0e-08 63.2 142 31.0
Lj2g0025410 Lotus japonicus HOM05D002201 ORTHO05D005125 4.0e-08 63.2 142 35.2
TPR.G8168 Trifolium pratense HOM05D002201 ORTHO05D005125 4.0e-08 63.2 143 30.8
Sabra15G0155100 Salix brachista HOM05D002201 ORTHO05D005125 5.2e-08 62.8 135 34.8
AL8G26830 Arabidopsis lyrata HOM05D002201 ORTHO05D005125 6.8e-08 62.4 170 27.6
Solyc06g036040.1 Solanum lycopersicum HOM05D002201 ORTHO05D005125 6.8e-08 62.4 99 40.4
HanXRQChr04g0099221 Helianthus annuus HOM05D002201 ORTHO05D005125 8.9e-08 62.0 152 30.3
Pp3c9_18540 Physcomitrium patens HOM05D002201 ORTHO05D005125 8.9e-08 62.0 176 28.4
Sabra12G0107200 Salix brachista HOM05D002201 ORTHO05D005125 8.9e-08 62.0 136 37.5
MSTRG.84 Avicennia marina HOM05D002201 ORTHO05D005125 1.2e-07 61.6 152 28.9
Nitab4.5_0000084g0040 Nicotiana tabacum HOM05D002201 ORTHO05D005125 2.0e-07 60.8 130 34.6
Haze_13667 Corylus avellana HOM05D002201 ORTHO05D005125 2.6e-07 60.5 148 30.4
DCAR_009374 Daucus carota HOM05D002201 ORTHO05D005125 2.6e-07 60.5 95 41.1
Manes.06G149200 Manihot esculenta HOM05D002201 ORTHO05D005125 2.6e-07 60.5 154 29.9
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 3.4e-07 60.1 161 30.4
MD01G1204600 Malus domestica HOM05D002201 ORTHO05D005125 3.4e-07 60.1 147 29.3
AT5G52410 Arabidopsis thaliana HOM05D002201 ORTHO05D005125 4.4e-07 59.7 149 29.5
Lsat_1_v5_gn_9_55340 Lactuca sativa HOM05D002201 ORTHO05D005125 4.4e-07 59.7 154 29.9
Nitab4.5_0004439g0130 Nicotiana tabacum HOM05D002201 ORTHO05D005125 5.7e-07 59.3 143 32.9
PGSC0003DMG402029918 Solanum tuberosum HOM05D002201 ORTHO05D005125 5.7e-07 59.3 115 38.3
Thecc.03G179200 Theobroma cacao HOM05D002201 ORTHO05D005125 7.5e-07 58.9 152 30.9
QL09p013774 Quercus lobata HOM05D002201 ORTHO05D005125 9.8e-07 58.5 146 30.1
EL10Ac3g05610 Beta vulgaris HOM05D002201 ORTHO05D005125 1.3e-06 58.2 155 27.1
Lalb_Chr03g0034681 Lupinus albus HOM05D002201 ORTHO05D005125 1.3e-06 58.2 139 29.5
Sed0001026 Sechium edule HOM05D002201 ORTHO05D005125 1.3e-06 58.2 154 27.3
arahy.Tifrunner.gnm1.ann1.JSJF91 Arachis hypogaea HOM05D002201 ORTHO05D005125 2.2e-06 57.4 126 31.7
Phvul.004G113900 Phaseolus vulgaris HOM05D002201 ORTHO05D005125 2.2e-06 57.4 157 31.2
MD07G1273100 Malus domestica HOM05D002201 ORTHO05D005125 2.9e-06 57.0 147 28.6
Sopen03g004370 Solanum pennellii HOM05D002201 ORTHO05D005125 2.9e-06 57.0 158 32.3
Lj8A23T61 Lonicera japonica HOM05D002201 ORTHO05D005125 3.7e-06 56.6 167 29.9
TAR375G1094 Trochodendron aralioides HOM05D002201 ORTHO05D005125 3.7e-06 56.6 62 51.6
Ciclev10004249m.g Citrus clementina HOM05D002201 ORTHO05D005125 4.9e-06 56.2 154 29.2
AUR62021166 Chenopodium quinoa HOM05D002201 ORTHO05D005125 6.4e-06 55.8 154 28.6
Sabra15G0155000 Salix brachista HOM05D002201 ORTHO05D005125 6.4e-06 55.8 135 34.8
CSS0012637 Camellia sinensis var. sinensis HOM05D002201 ORTHO05D005125 8.3e-06 55.5 156 30.1
MBI17_g33588_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D005125 8.3e-06 55.5 152 31.6
Oeu056271.1 Olea europaea HOM05D002201 ORTHO05D005125 8.3e-06 55.5 148 29.7
Solyc03g025530.3 Solanum lycopersicum HOM05D002201 ORTHO05D005125 8.3e-06 55.5 158 31.0


User provided reference genes

Program Settings