Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 0.0e+00 1626.7 911 100.0
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 9.2e-205 718.0 877 50.6
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 9.2e-197 691.4 881 49.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.1e-193 680.2 906 49.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 4.3e-170 602.8 862 44.4
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.7e-163 578.6 879 43.7
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 4.2e-157 559.7 895 42.0
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 8.7e-155 552.0 871 42.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.6e-153 547.7 872 40.9
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 3.1e-152 543.5 862 42.0
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 6.9e-152 542.3 863 42.1
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.5e-151 541.2 895 42.0
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 6.4e-150 535.8 903 40.1
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 5.5e-149 532.7 872 41.1
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.5e-148 530.0 863 41.9
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.1e-145 520.8 914 38.6
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 4.8e-145 519.6 876 42.4
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.4e-144 518.1 915 38.7
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-144 517.7 882 40.6
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 3.4e-143 513.5 906 39.7
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 7.6e-143 512.3 872 39.6
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.6e-143 512.3 871 41.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.0e-142 511.9 875 40.3
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.3e-142 511.5 881 41.0
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.3e-142 511.5 892 39.7
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 2.2e-142 510.8 888 41.4
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 4.2e-141 506.5 873 40.4
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 5.5e-141 506.1 865 40.9
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 5.5e-141 506.1 871 39.8
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.6e-140 504.6 868 40.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.7e-140 503.8 872 40.8
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.6e-140 503.1 882 39.7
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.6e-140 503.1 881 40.1
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 6.0e-140 502.7 867 39.8
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.0e-139 501.9 863 38.8
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.3e-139 501.5 871 38.8
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.3e-139 501.5 862 39.4
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.3e-139 500.7 892 39.3
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.3e-139 500.7 872 40.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.0e-139 500.4 892 39.2
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 3.0e-139 500.4 867 40.3
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 5.1e-139 499.6 916 38.5
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.7e-139 499.2 886 38.4
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.7e-139 498.8 872 40.6
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.1e-138 498.4 867 39.6
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.5e-138 498.0 898 39.8
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.9e-138 497.7 870 39.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.5e-138 497.3 866 38.7
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 5.7e-138 496.1 898 39.3
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 5.7e-138 496.1 868 37.8
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 5.7e-138 496.1 867 39.3
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 7.4e-138 495.7 867 40.0
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 7.4e-138 495.7 900 38.7
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 9.7e-138 495.4 900 38.8
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.2e-137 494.2 890 40.0
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.7e-137 493.4 867 39.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 4.8e-137 493.0 872 38.9
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.8e-137 493.0 874 39.9
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 2.4e-136 490.7 859 39.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 4.1e-136 490.0 895 38.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.1e-136 490.0 874 40.6
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 5.3e-136 489.6 870 40.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.3e-136 489.6 873 39.4
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-135 488.4 872 40.0
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.2e-135 488.4 861 38.2
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 4.5e-135 486.5 878 39.5
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 4.5e-135 486.5 875 39.3
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.7e-135 485.7 880 39.2
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.0e-134 485.3 864 40.4
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.7e-134 484.6 869 39.9
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 2.2e-134 484.2 724 43.4
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 1.1e-133 481.9 852 39.9
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 1.4e-133 481.5 867 39.9
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 3.2e-133 480.3 858 38.6
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.6e-132 478.0 908 37.9
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.0e-131 475.3 865 39.2
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 3.0e-131 473.8 900 38.4
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-130 471.9 863 38.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 9.7e-130 468.8 913 37.8
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.7e-129 468.0 874 38.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.8e-129 467.2 869 38.6
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 2.8e-129 467.2 991 35.8
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.1e-128 465.3 912 37.8
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-128 465.3 912 37.7
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.4e-128 464.2 913 37.7
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 2.2e-126 457.6 869 37.1
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 5.0e-126 456.4 905 37.1
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.4e-125 454.9 881 38.3
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 8.8e-123 445.7 929 36.6
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.6e-122 444.1 875 37.4
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 9.7e-122 442.2 863 37.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.3e-121 441.8 983 35.2
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.1e-120 438.7 856 37.6
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.8e-120 438.0 745 40.4
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.8e-120 438.0 883 35.4
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.1e-120 436.8 909 35.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.9e-118 430.6 897 36.1
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.8e-118 430.3 875 36.0
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.9e-117 427.9 872 36.7
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.2e-117 427.2 617 45.1
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.6e-116 424.9 893 35.5
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.6e-116 424.9 915 36.4
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 2.7e-116 424.1 877 35.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.8e-115 421.4 876 37.1
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.3e-115 421.0 866 35.9
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 3.0e-115 420.6 884 35.2
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.9e-115 420.2 1020 34.0
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 5.2e-115 419.9 870 35.7
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.1e-114 418.7 951 34.6
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.0e-114 417.9 867 36.8
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 4.8e-113 413.3 868 35.7
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 2.4e-112 411.0 900 34.7
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 3.1e-112 410.6 738 38.8
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 4.1e-112 410.2 913 34.9
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 4.1e-112 410.2 885 35.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 5.9e-111 406.4 905 34.9
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 5.9e-111 406.4 902 34.8
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.9e-111 406.4 652 41.6
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.9e-110 404.1 861 35.1
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 5.5e-109 399.8 863 35.6
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 7.2e-109 399.4 898 34.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 4.7e-108 396.7 883 34.4
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 1.2e-106 392.1 889 34.8
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 3.4e-106 390.6 893 33.8
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-106 389.8 748 36.6
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.1e-104 383.6 912 33.0
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.5e-103 380.2 926 34.4
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 2.2e-102 377.9 898 32.9
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.9e-102 377.5 866 35.3
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-102 376.3 795 36.9
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.7e-100 370.2 677 39.7
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 8.0e-100 369.4 590 42.0
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 5.4e-96 356.7 673 38.5
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.2e-95 355.5 675 37.9
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 2.7e-95 354.4 698 38.3
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 2.7e-95 354.4 674 38.1
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 3.5e-95 354.0 874 33.1
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.0e-94 352.4 675 38.1
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 5.0e-94 350.1 670 38.7
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.6e-92 344.0 879 32.9
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.2e-90 339.0 910 33.6
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.1e-85 322.4 580 39.0
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 3.6e-84 317.4 610 37.5
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 5.2e-83 313.5 633 36.7
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 9.6e-61 239.6 306 47.1
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 3.6e-60 237.7 826 30.5
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.8e-59 235.3 678 31.0
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 4.6e-55 220.7 834 27.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 6.0e-55 220.3 481 35.8
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.3e-54 219.2 348 43.1
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 8.4e-49 199.9 471 33.3
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 8.4e-49 199.9 474 36.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.9e-45 188.7 220 51.4
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 2.1e-36 158.7 356 34.6
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.6e-34 150.2 118 58.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 3.5e-31 141.4 797 25.1
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.8e-28 131.7 196 42.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 6.2e-28 130.6 334 32.0
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 9.0e-27 126.7 268 36.2
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 4.5e-26 124.4 250 35.2
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 7.6e-26 123.6 209 37.3
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.1e-24 119.8 201 36.8
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.5e-24 117.5 152 44.1
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.0e-22 113.2 86 66.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 5.7e-21 107.5 145 41.4
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-19 102.8 126 47.6
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.5e-16 92.0 86 60.5
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 4.3e-13 81.3 125 38.4
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.8e-12 78.6 82 51.2
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-12 78.2 65 56.9
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.8e-11 75.9 161 31.7
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 5.3e-11 74.3 92 46.7
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.5e-10 72.8 141 35.5
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.5e-10 71.2 92 45.7
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 5.9e-10 70.9 57 56.1
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 5.9e-10 70.9 70 45.7
AagrBONN_evm.TU.Sc2ySwM_344.2255 Anthoceros agrestis HOM05D003622 ORTHO05D074183 3.2e-08 65.1 75 54.7
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.6e-07 62.8 52 59.6
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.1e-07 62.4 181 35.9
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.3e-06 58.9 154 31.2
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.0e-06 58.5 113 38.1
Actinidia38716 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.8e-06 57.0 57 43.9


User provided reference genes

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