Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.8e-103 377.5 210 100.0
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.9e-28 130.2 166 53.0
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 5.5e-28 128.6 121 60.3
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.6e-22 109.8 123 55.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 2.2e-21 106.7 120 59.2
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 4.2e-20 102.4 92 67.4
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.6e-19 100.5 121 53.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.6e-19 99.0 113 60.2
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 4.6e-19 99.0 92 70.7
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 7.9e-19 98.2 89 73.0
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.0e-18 97.8 121 52.9
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.4e-18 97.4 102 61.8
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.4e-18 97.4 120 57.5
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.4e-18 97.4 121 49.6
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.3e-18 96.7 121 54.5
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 3.9e-18 95.9 121 53.7
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 5.1e-18 95.5 128 55.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 5.1e-18 95.5 93 68.8
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.7e-18 95.1 127 55.9
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.5e-17 94.0 121 52.1
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 2.0e-17 93.6 127 52.0
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.5e-17 93.2 130 53.8
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.5e-17 93.2 127 55.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.5e-17 93.2 89 62.9
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.3e-17 92.8 89 69.7
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 4.3e-17 92.4 127 51.2
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 5.7e-17 92.0 127 51.2
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 5.7e-17 92.0 127 51.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.7e-17 92.0 127 51.2
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 5.7e-17 92.0 109 58.7
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 7.4e-17 91.7 113 57.5
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 7.4e-17 91.7 102 62.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 9.7e-17 91.3 169 42.0
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 9.7e-17 91.3 130 51.5
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.3e-16 90.9 130 52.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.3e-16 90.9 120 55.0
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.7e-16 90.5 102 61.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.2e-16 90.1 128 50.8
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 2.2e-16 90.1 132 50.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.2e-16 90.1 86 69.8
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.8e-16 89.7 130 52.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 2.8e-16 89.7 127 51.2
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 2.8e-16 89.7 94 66.0
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.8e-16 89.7 165 42.4
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.7e-16 89.4 132 50.0
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 4.8e-16 89.0 125 52.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.8e-16 89.0 102 60.8
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 6.3e-16 88.6 93 62.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 6.3e-16 88.6 89 65.2
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 6.3e-16 88.6 174 40.2
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 6.3e-16 88.6 180 45.0
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 6.3e-16 88.6 123 52.0
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 8.2e-16 88.2 89 64.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.1e-15 87.8 84 69.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.4e-15 87.4 86 67.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.4e-15 87.4 123 51.2
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.4e-15 87.4 89 69.7
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.4e-15 87.4 92 63.0
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.8e-15 87.0 97 61.9
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.8e-15 87.0 98 62.2
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 3.1e-15 86.3 89 65.2
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.1e-15 86.3 85 68.2
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 4.1e-15 85.9 92 62.0
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 4.1e-15 85.9 79 64.6
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.3e-15 85.5 97 61.9
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 5.3e-15 85.5 85 70.6
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 5.3e-15 85.5 92 66.3
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 9.1e-15 84.7 81 67.9
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-14 84.0 89 66.3
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.0e-14 83.6 122 50.8
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 2.0e-14 83.6 126 49.2
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.0e-14 83.6 73 75.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.6e-14 83.2 89 65.2
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 2.6e-14 83.2 113 57.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.6e-14 83.2 78 69.2
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.4e-14 82.8 78 73.1
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.7e-14 81.6 83 68.7
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 7.7e-14 81.6 132 50.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.0e-13 81.3 122 50.8
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.0e-13 81.3 121 49.6
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.3e-13 80.9 92 63.0
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.7e-13 80.5 89 66.3
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 2.2e-13 80.1 92 63.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 2.2e-13 80.1 74 74.3
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.9e-13 79.7 89 66.3
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.9e-13 79.7 89 66.3
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 2.9e-13 79.7 89 62.9
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.9e-13 79.7 92 64.1
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.8e-13 79.3 116 56.9
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.8e-13 79.3 116 56.9
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.8e-13 79.3 116 56.9
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 3.8e-13 79.3 93 61.3
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 3.8e-13 79.3 93 61.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 6.5e-13 78.6 92 63.0
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 8.5e-13 78.2 83 66.3
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.4e-12 77.4 93 61.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.4e-12 77.4 74 73.0
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.9e-12 77.0 146 43.2
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 5.5e-12 75.5 73 75.3
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.2e-11 74.3 85 64.7
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 4.4e-09 65.9 72 66.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.7e-08 62.8 131 39.7


User provided reference genes

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