Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0024s0030 Marchantia polymorpha HOM05D003303 ORTHO05D031187 4.6e-135 484.6 247 100.0
SMO304G0046 Selaginella moellendorffii HOM05D003303 ORTHO05D031187 9.0e-30 134.8 196 36.7
AagrBONN_evm.TU.Sc2ySwM_362.2366 Anthoceros agrestis HOM05D003303 ORTHO05D031187 1.5e-24 117.5 201 30.8
Duzib168G0888 Durio zibethinus HOM05D003303 ORTHO05D003887 1.1e-14 84.7 209 24.4
CBR_g49784 Chara braunii HOM05D003303 ORTHO05D003887 1.4e-14 84.3 190 28.9
Gohir.D08G257300 Gossypium hirsutum HOM05D003303 ORTHO05D003887 1.8e-14 84.0 199 25.1
Migut.E01788 Erythranthe guttata HOM05D003303 ORTHO05D003887 3.1e-14 83.2 207 27.1
GSVIVG01035826001 Vitis vinifera HOM05D003303 ORTHO05D003887 4.1e-14 82.8 216 25.9
Manes.03G016900 Manihot esculenta HOM05D003303 ORTHO05D003887 5.3e-14 82.4 213 24.9
Gohir.A08G236700 Gossypium hirsutum HOM05D003303 ORTHO05D003887 6.9e-14 82.0 213 24.9
Actinidia13249 Actinidia chinensis HOM05D003303 ORTHO05D003887 1.2e-13 81.3 215 24.2
Eucgr.C02806 Eucalyptus grandis HOM05D003303 ORTHO05D003887 1.2e-13 81.3 230 22.6
ATR1156G058 Amborella trichopoda HOM05D003303 ORTHO05D003887 1.5e-13 80.9 214 25.7
Lj8A668G29 Lonicera japonica HOM05D003303 ORTHO05D003887 2.0e-13 80.5 205 25.9
Lj8A679G18 Lonicera japonica HOM05D003303 ORTHO05D003887 2.0e-13 80.5 205 25.9
BcaC04g19244 Brassica carinata HOM05D003303 ORTHO05D003887 2.6e-13 80.1 208 25.0
A10p26440 Brassica napus HOM05D003303 ORTHO05D003887 2.6e-13 80.1 208 24.5
C09p65610 Brassica napus HOM05D003303 ORTHO05D003887 2.6e-13 80.1 208 25.0
BolC9t59382H Brassica oleracea HOM05D003303 ORTHO05D003887 2.6e-13 80.1 208 24.5
BraA10t44701Z Brassica rapa HOM05D003303 ORTHO05D003887 2.6e-13 80.1 208 24.5
Gorai.004G274300 Gossypium raimondii HOM05D003303 ORTHO05D003887 2.6e-13 80.1 199 24.6
Nn2g11966 Nelumbo nucifera HOM05D003303 ORTHO05D003887 2.6e-13 80.1 219 26.0
THA.LOC104799228 Tarenaya hassleriana HOM05D003303 ORTHO05D003887 2.6e-13 80.1 220 24.1
Aa31LG3G15910 Aethionema arabicum HOM05D003303 ORTHO05D003887 4.5e-13 79.3 209 25.8
CANSAT64G2029 Cannabis sativa HOM05D003303 ORTHO05D003887 4.5e-13 79.3 214 23.8
AT5G11280 Arabidopsis thaliana HOM05D003303 ORTHO05D003887 7.6e-13 78.6 196 23.5
Sp6g32280 Schrenkiella parvula HOM05D003303 ORTHO05D003887 7.6e-13 78.6 208 24.0
Lj1g0001911 Lotus japonicus HOM05D003303 ORTHO05D003887 1.3e-12 77.8 207 24.2
BcaB08g37075 Brassica carinata HOM05D003303 ORTHO05D003887 1.7e-12 77.4 208 24.0
Glyma.06G069800 Glycine max HOM05D003303 ORTHO05D003887 1.7e-12 77.4 208 24.0
Lsat_1_v5_gn_5_30500 Lactuca sativa HOM05D003303 ORTHO05D003887 1.7e-12 77.4 210 23.8
Sed0025998 Sechium edule HOM05D003303 ORTHO05D003887 1.7e-12 77.4 215 23.7
Medtr3g107550 Medicago truncatula HOM05D003303 ORTHO05D003887 2.2e-12 77.0 220 25.0
Hma1.2p1_0000F.1_g000400 Hydrangea macrophylla HOM05D003303 ORTHO05D003887 2.9e-12 76.6 199 26.1
Glyma.04G068100 Glycine max HOM05D003303 ORTHO05D003887 5.0e-12 75.9 208 24.0
TWI34G1555 Tripterygium wilfordii HOM05D003303 ORTHO05D003887 5.0e-12 75.9 230 22.6
FAN20G0011 Fragaria x ananassa HOM05D003303 ORTHO05D003887 6.5e-12 75.5 225 24.9
SEGI_05060 Sequoiadendron giganteum HOM05D003303 ORTHO05D003887 6.5e-12 75.5 210 27.1
CSS0039322 Camellia sinensis var. sinensis HOM05D003303 ORTHO05D003887 8.4e-12 75.1 216 22.2
ClCG08G013220 Citrullus lanatus HOM05D003303 ORTHO05D003887 8.4e-12 75.1 210 22.9
Ciclev10009474m.g Citrus clementina HOM05D003303 ORTHO05D003887 1.1e-11 74.7 209 23.0
Dinv30167 Davidia involucrata HOM05D003303 ORTHO05D003887 1.1e-11 74.7 216 23.6
Phvul.009G094400 Phaseolus vulgaris HOM05D003303 ORTHO05D003887 1.4e-11 74.3 208 24.5
Sed0002484 Sechium edule HOM05D003303 ORTHO05D003887 1.4e-11 74.3 215 22.8
TAR636G1230 Trochodendron aralioides HOM05D003303 ORTHO05D003887 1.4e-11 74.3 199 22.6
Zm00001eb162550 Zea mays HOM05D003303 ORTHO05D003887 1.4e-11 74.3 203 24.1
Aqoxy7G02100 Aquilegia oxysepala HOM05D003303 ORTHO05D003887 1.9e-11 73.9 200 23.0
CiPaw.08G012800 Carya illinoinensis HOM05D003303 ORTHO05D003887 1.9e-11 73.9 213 23.0
Psat5g028480 Pisum sativum HOM05D003303 ORTHO05D003887 1.9e-11 73.9 214 24.8
MELO3C011249.2 Cucumis melo HOM05D003303 ORTHO05D003887 2.5e-11 73.6 210 22.9
Thhalv10014677m.g Eutrema salsugineum HOM05D003303 ORTHO05D003887 2.5e-11 73.6 208 23.1
PGR044G1059 Punica granatum HOM05D003303 ORTHO05D003887 2.5e-11 73.6 204 25.0
AUR62030643 Chenopodium quinoa HOM05D003303 ORTHO05D003887 3.2e-11 73.2 192 23.4
Lalb_Chr23g0268741 Lupinus albus HOM05D003303 ORTHO05D003887 3.2e-11 73.2 192 23.4
Potri.006G251600 Populus trichocarpa HOM05D003303 ORTHO05D003887 3.2e-11 73.2 226 21.7
Atru.chr7.2388 Acer truncatum HOM05D003303 ORTHO05D003887 4.2e-11 72.8 220 23.6
HanXRQChr08g0234811 Helianthus annuus HOM05D003303 ORTHO05D003887 4.2e-11 72.8 209 24.9
SGA_v2.0_scaffold64G21909 Striga asiatica HOM05D003303 ORTHO05D003887 4.2e-11 72.8 183 24.0
Zm00001eb342310 Zea mays HOM05D003303 ORTHO05D003887 4.2e-11 72.8 202 22.8
Actinidia22360 Actinidia chinensis HOM05D003303 ORTHO05D003887 5.5e-11 72.4 220 22.3
Cc08_g00960 Coffea canephora HOM05D003303 ORTHO05D003887 5.5e-11 72.4 188 25.0
CsaV3_2G031950 Cucumis sativus L. HOM05D003303 ORTHO05D003887 5.5e-11 72.4 209 23.0
vmacro11152 Vaccinium macrocarpon HOM05D003303 ORTHO05D003887 7.2e-11 72.0 208 21.6
HPP92_023167 Vanilla planifolia HOM05D003303 ORTHO05D003887 7.2e-11 72.0 187 25.1
FAN27G1304 Fragaria x ananassa HOM05D003303 ORTHO05D003887 9.3e-11 71.6 176 24.4
Lalb_Chr08g0243991 Lupinus albus HOM05D003303 ORTHO05D003887 9.3e-11 71.6 205 23.9
Peaxi162Scf00603g00012 Petunia axillaris HOM05D003303 ORTHO05D003887 9.3e-11 71.6 193 25.4
Carub.0006s0975 Capsella rubella HOM05D003303 ORTHO05D003887 1.2e-10 71.2 196 21.9
Cpa.g.sc533.1 Carica papaya HOM05D003303 ORTHO05D003887 1.2e-10 71.2 220 23.6
FvH4_2g29460 Fragaria vesca HOM05D003303 ORTHO05D003887 1.2e-10 71.2 178 25.8
Nn8g39390 Nelumbo nucifera HOM05D003303 ORTHO05D003887 2.1e-10 70.5 199 24.1
Sc09g0008410 Simmondsia chinensis HOM05D003303 ORTHO05D003887 2.1e-10 70.5 172 24.4
Sopen06g012300 Solanum pennellii HOM05D003303 ORTHO05D003887 2.1e-10 70.5 190 23.2
PSO210G7678 Papaver somniferum HOM05D003303 ORTHO05D003887 3.5e-10 69.7 211 20.9
TWI63G1648 Tripterygium wilfordii HOM05D003303 ORTHO05D003887 3.5e-10 69.7 209 20.6
Cpa.g.sc10.225 Carica papaya HOM05D003303 ORTHO05D003887 6.1e-10 68.9 153 26.8
RcHm_v2.0_Chr6g0298251 Rosa chinensis HOM05D003303 ORTHO05D003887 6.1e-10 68.9 228 22.8
SalBow1G3705 Salvia bowleyana HOM05D003303 ORTHO05D003887 6.1e-10 68.9 207 24.2
TPR.G31761 Trifolium pratense HOM05D003303 ORTHO05D003887 7.9e-10 68.6 192 23.4
VMungo1309G1624 Vigna mungo HOM05D003303 ORTHO05D003887 7.9e-10 68.6 208 23.6
arahy.Tifrunner.gnm1.ann1.DJG6PN Arachis hypogaea HOM05D003303 ORTHO05D003887 1.0e-09 68.2 199 24.1
Nitab4.5_0000447g0060 Nicotiana tabacum HOM05D003303 ORTHO05D003887 1.0e-09 68.2 203 23.2
Hund20355 Selenicereus undatus HOM05D003303 ORTHO05D003887 1.0e-09 68.2 192 22.9
Ah.12g064040 Amaranthus hybridus HOM05D003303 ORTHO05D003887 1.3e-09 67.8 192 21.4
Aqoxy7G03733 Aquilegia oxysepala HOM05D003303 ORTHO05D003887 1.3e-09 67.8 192 22.9
EL10Ac2g02608 Beta vulgaris HOM05D003303 ORTHO05D003887 1.8e-09 67.4 192 21.9
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 2.3e-09 67.0 175 23.4
Nitab4.5_0002257g0020 Nicotiana tabacum HOM05D003303 ORTHO05D003887 3.0e-09 66.6 198 23.2
arahy.Tifrunner.gnm1.ann1.CWZP7X Arachis hypogaea HOM05D003303 ORTHO05D003887 3.9e-09 66.2 192 21.9
MSTRG.25996 Avicennia marina HOM05D003303 ORTHO05D003887 5.1e-09 65.9 159 25.2
Manes.11G053300 Manihot esculenta HOM05D003303 ORTHO05D003887 5.1e-09 65.9 178 23.0
SGA_v2.0_scaffold20G09143 Striga asiatica HOM05D003303 ORTHO05D003887 8.7e-09 65.1 202 21.3
Mapoly0048s0064 Marchantia polymorpha HOM05D003303 ORTHO05D003887 1.1e-08 64.7 164 25.6
CAN.G340.3 Capsicum annuum HOM05D003303 ORTHO05D003887 1.9e-08 63.9 192 22.4
COL.COLO4_00194 Corchorus olitorius HOM05D003303 ORTHO05D003887 1.9e-08 63.9 175 22.9
Os01g0555300 Oryza sativa ssp. japonica HOM05D003303 ORTHO05D003887 2.5e-08 63.5 195 20.5
CSS0042620 Camellia sinensis var. sinensis HOM05D003303 ORTHO05D003887 3.3e-08 63.2 199 25.1
MSTRG.1714 Avicennia marina HOM05D003303 ORTHO05D003887 5.7e-08 62.4 145 26.9
Prupe.1G478100 Prunus persica HOM05D003303 ORTHO05D003887 7.4e-08 62.0 181 21.5
SMO358G0079 Selaginella moellendorffii HOM05D003303 ORTHO05D003887 7.4e-08 62.0 159 25.2
CDE05G1646 Ceratophyllum demersum HOM05D003303 ORTHO05D003887 9.7e-08 61.6 167 22.8
Thecc.06G071200 Theobroma cacao HOM05D003303 ORTHO05D003887 9.7e-08 61.6 158 24.7
Nitab4.5_0006574g0030 Nicotiana tabacum HOM05D003303 ORTHO05D003887 1.3e-07 61.2 153 24.8
Rhsim02G0195600 Rhododendron simsii HOM05D003303 ORTHO05D003887 1.6e-07 60.8 179 21.2
AagrBONN_evm.TU.Sc2ySwM_228.3014 Anthoceros agrestis HOM05D003303 ORTHO05D003887 2.2e-07 60.5 160 25.6
CiPaw.01G244800 Carya illinoinensis HOM05D003303 ORTHO05D003887 8.2e-07 58.5 184 22.3
Sc10g0005730 Simmondsia chinensis HOM05D003303 ORTHO05D003887 8.2e-07 58.5 158 22.2
Gorai.011G081400 Gossypium raimondii HOM05D003303 ORTHO05D003887 1.1e-06 58.2 161 23.0
HanXRQChr10g0303091 Helianthus annuus HOM05D003303 ORTHO05D003887 1.4e-06 57.8 158 19.6
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 1.4e-06 57.8 153 23.5
Ciclev10026958m.g Citrus clementina HOM05D003303 ORTHO05D003887 1.8e-06 57.4 158 24.1
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.8e-06 57.4 158 24.1
FvH4_6g30260 Fragaria vesca HOM05D003303 ORTHO05D003887 3.1e-06 56.6 158 23.4
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 3.1e-06 56.6 158 23.4
Sp5g35610 Schrenkiella parvula HOM05D004715 ORTHO05D005644 4.1e-06 56.2 178 25.3
Solyc03g116470.2 Solanum lycopersicum HOM05D003303 ORTHO05D003887 4.1e-06 56.2 153 22.2
Sopen03g035360 Solanum pennellii HOM05D003303 ORTHO05D003887 4.1e-06 56.2 153 22.2
Gohir.A10G076100 Gossypium hirsutum HOM05D003303 ORTHO05D003887 5.3e-06 55.8 158 21.5
Peaxi162Scf00274g00860 Petunia axillaris HOM05D003303 ORTHO05D003887 5.3e-06 55.8 153 22.9
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 6.9e-06 55.5 158 23.4


User provided reference genes

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