Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0024s0017 Marchantia polymorpha HOM05D001384 ORTHO05D001215 8.3e-30 133.3 78 100.0
Mapoly0079s0002 Marchantia polymorpha HOM05D001384 ORTHO05D001215 1.0e-16 89.7 78 64.1
CANSAT56G0949 Cannabis sativa HOM05D001384 ORTHO05D001215 2.1e-09 65.5 73 64.4
SEGI_03889 Sequoiadendron giganteum HOM05D001384 ORTHO05D001215 4.7e-09 64.3 61 59.0
SEGI_03997 Sequoiadendron giganteum HOM05D001384 ORTHO05D001215 4.7e-09 64.3 61 59.0
Ciclev10023364m.g Citrus clementina HOM05D001384 ORTHO05D001215 3.1e-08 61.6 70 60.0
MELO3C006062.2 Cucumis melo HOM05D001384 ORTHO05D001215 4.0e-08 61.2 72 62.5
CDE08G0321 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 6.8e-08 60.5 64 51.6
ECA236G1259 Erigeron canadensis HOM05D001384 ORTHO05D001215 6.8e-08 60.5 76 59.2
Os01g0657000 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 8.9e-08 60.1 67 55.2
Actinidia20196 Actinidia chinensis HOM05D001384 ORTHO05D001215 1.2e-07 59.7 70 57.1
Lsat_1_v5_gn_7_1901 Lactuca sativa HOM05D001384 ORTHO05D001215 1.5e-07 59.3 64 54.7
AagrBONN_evm.TU.Sc2ySwM_117.409 Anthoceros agrestis HOM05D001384 ORTHO05D001215 2.0e-07 58.9 63 60.3
CDE02G0411 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 2.0e-07 58.9 74 48.6
HPP92_026774 Vanilla planifolia HOM05D001384 ORTHO05D001215 2.0e-07 58.9 61 63.9
HanXRQChr04g0121001 Helianthus annuus HOM05D001384 ORTHO05D001215 3.4e-07 58.2 67 52.2
Nitab4.5_0000305g0110 Nicotiana tabacum HOM05D001384 ORTHO05D001215 3.4e-07 58.2 73 56.2
Potri.014G094800 Populus trichocarpa HOM05D001384 ORTHO05D001215 3.4e-07 58.2 70 58.6
SMO143G0078 Selaginella moellendorffii HOM05D001384 ORTHO05D001215 4.4e-07 57.8 32 87.5
CiPaw.01G072100 Carya illinoinensis HOM05D001384 ORTHO05D001215 5.8e-07 57.4 60 53.3
QL04p059433 Quercus lobata HOM05D001384 ORTHO05D001215 5.8e-07 57.4 73 61.6
Gohir.A12G110700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 7.5e-07 57.0 68 51.5
Gohir.D12G114000 Gossypium hirsutum HOM05D001384 ORTHO05D001215 7.5e-07 57.0 68 51.5
Gorai.008G123500 Gossypium raimondii HOM05D001384 ORTHO05D001215 7.5e-07 57.0 68 51.5
Atru.chr5.621 Acer truncatum HOM05D001384 ORTHO05D001215 9.8e-07 56.6 67 49.3
Actinidia28493 Actinidia chinensis HOM05D001384 ORTHO05D001215 9.8e-07 56.6 60 51.7
CSS0021424 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 9.8e-07 56.6 67 56.7
QL04p058637 Quercus lobata HOM05D001384 ORTHO05D001215 9.8e-07 56.6 50 76.0
CDE09G1367 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 1.3e-06 56.2 64 53.1
Lj4g0006841 Lotus japonicus HOM05D001384 ORTHO05D001215 1.3e-06 56.2 71 60.6
Nitab4.5_0009232g0020 Nicotiana tabacum HOM05D001384 ORTHO05D001215 1.3e-06 56.2 73 54.8
Peaxi162Scf00099g01816 Petunia axillaris HOM05D001384 ORTHO05D001215 1.3e-06 56.2 59 57.6
PGR031G3192 Punica granatum HOM05D001384 ORTHO05D001215 1.3e-06 56.2 74 48.6
Haze_15620 Corylus avellana HOM05D001384 ORTHO05D001215 1.7e-06 55.8 73 58.9
MBI07_g20448_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 1.7e-06 55.8 62 53.2
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.7e-06 55.8 56 53.6
GSVIVG01028741001 Vitis vinifera HOM05D001384 ORTHO05D001215 1.7e-06 55.8 63 52.4
CiPaw.11G124600 Carya illinoinensis HOM05D001384 ORTHO05D001215 2.2e-06 55.5 67 49.3
Duzib138G1328 Durio zibethinus HOM05D001384 ORTHO05D001215 2.2e-06 55.5 78 51.3
Nn8g38978 Nelumbo nucifera HOM05D001384 ORTHO05D001215 2.2e-06 55.5 59 54.2
Nitab4.5_0008261g0010 Nicotiana tabacum HOM05D001384 ORTHO05D001215 2.9e-06 55.1 60 53.3
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 2.9e-06 55.1 66 51.5
Aa31LG1G27700 Aethionema arabicum HOM05D001384 ORTHO05D001215 3.7e-06 54.7 62 53.2
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 3.7e-06 54.7 73 52.1
CsaV3_3G008420 Cucumis sativus L. HOM05D001384 ORTHO05D001215 3.7e-06 54.7 67 59.7
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 3.7e-06 54.7 56 51.8
Lsat_1_v5_gn_7_38720 Lactuca sativa HOM05D001384 ORTHO05D001215 3.7e-06 54.7 62 48.4
Solyc10g011730.3 Solanum lycopersicum HOM05D001384 ORTHO05D001215 3.7e-06 54.7 61 55.7
TWI39G0811 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 3.7e-06 54.7 59 62.7
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 3.7e-06 54.7 61 67.2
CDE02G4026 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 4.9e-06 54.3 60 50.0
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 4.9e-06 54.3 53 50.9
DCAR_006964 Daucus carota HOM05D001384 ORTHO05D001215 4.9e-06 54.3 72 48.6
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 4.9e-06 54.3 68 55.9
Gohir.A10G068700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 4.9e-06 54.3 60 53.3
Sed0001168 Sechium edule HOM05D001384 ORTHO05D001215 4.9e-06 54.3 55 65.5
Sed0020989 Sechium edule HOM05D001384 ORTHO05D001215 4.9e-06 54.3 56 57.1
Sopen10g005520 Solanum pennellii HOM05D001384 ORTHO05D001215 4.9e-06 54.3 61 55.7
THA.LOC104817336 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 4.9e-06 54.3 71 54.9
AT3G61640 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 6.4e-06 53.9 71 46.5
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 6.4e-06 53.9 60 55.0
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 6.4e-06 53.9 60 55.0
MD01G1076000 Malus domestica HOM05D001384 ORTHO05D001215 6.4e-06 53.9 35 74.3
Manes.01G249100 Manihot esculenta HOM05D001384 ORTHO05D001215 6.4e-06 53.9 51 70.6
Nitab4.5_0000522g0080 Nicotiana tabacum HOM05D001384 ORTHO05D001215 6.4e-06 53.9 67 53.7
Peaxi162Scf01012g00121 Petunia axillaris HOM05D001384 ORTHO05D001215 6.4e-06 53.9 73 54.8
Prupe.2G183500 Prunus persica HOM05D001384 ORTHO05D001215 6.4e-06 53.9 74 47.3
TWI14G0223 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 6.4e-06 53.9 59 66.1
BcaC02g10241 Brassica carinata HOM05D001384 ORTHO05D001215 8.3e-06 53.5 72 50.0
CSS0003232 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 8.3e-06 53.5 70 57.1
Cpa.g.sc194.9 Carica papaya HOM05D001384 ORTHO05D001215 8.3e-06 53.5 60 56.7
ClCG05G001090 Citrullus lanatus HOM05D001384 ORTHO05D001215 8.3e-06 53.5 65 63.1
Duzib084G1120 Durio zibethinus HOM05D001384 ORTHO05D001215 8.3e-06 53.5 70 52.9
Lalb_Chr04g0261751 Lupinus albus HOM05D001384 ORTHO05D001215 8.3e-06 53.5 31 83.9
MBI06_g32761_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 8.3e-06 53.5 67 49.3
MD07G1144900 Malus domestica HOM05D001384 ORTHO05D001215 8.3e-06 53.5 35 74.3


User provided reference genes

Program Settings