Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 0.0e+00 2349.3 1211 100.0
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 2.6e-308 1062.4 1256 49.5
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 7.0e-261 904.8 1220 44.3
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.2e-252 877.5 1226 42.4
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 9.5e-242 841.3 1209 41.4
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 3.1e-240 836.3 1204 41.6
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 2.6e-239 833.2 1223 41.1
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 2.8e-233 813.1 1207 40.8
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 1.4e-232 810.8 1214 40.0
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 2.2e-230 803.5 1209 40.1
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 6.2e-225 785.4 1220 40.7
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 1.1e-224 784.6 1214 39.3
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 1.8e-224 783.9 1227 39.6
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 4.9e-222 775.8 1217 39.9
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.4e-221 774.2 1232 39.0
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 4.2e-221 772.7 1220 39.5
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 9.3e-221 771.5 1209 39.8
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.1e-220 770.4 1216 39.8
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.1e-220 770.4 1216 39.1
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.7e-220 770.0 1212 39.6
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.0e-219 768.1 1212 39.6
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.3e-219 767.7 1215 39.4
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 3.0e-219 766.5 1217 39.2
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.1e-218 764.6 1215 38.8
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 3.3e-218 763.1 1213 39.4
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 4.3e-218 762.7 1216 39.0
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 4.3e-218 762.7 1215 39.3
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 4.3e-218 762.7 1215 39.3
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 4.8e-217 759.2 1208 39.8
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 4.8e-217 759.2 1215 38.8
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 5.3e-216 755.7 1218 38.8
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 5.3e-216 755.7 1209 38.6
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 6.9e-216 755.4 1228 38.3
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 2.6e-215 753.4 1218 38.8
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 1.3e-214 751.1 1218 39.3
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 4.9e-214 749.2 1207 38.4
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 1.4e-213 747.7 1220 39.8
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 7.1e-213 745.3 1251 38.4
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 4.6e-212 742.7 1216 38.6
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 1.8e-211 740.7 1223 38.3
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 1.9e-210 737.3 1205 38.9
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 2.5e-210 736.9 1218 37.2
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 2.5e-210 736.9 1215 37.9
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 4.3e-210 736.1 1215 38.2
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 2.8e-209 733.4 1211 38.1
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 6.2e-209 732.3 1216 38.6
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 1.1e-208 731.5 1212 38.2
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 1.4e-208 731.1 1208 38.2
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 1.4e-208 731.1 1219 37.9
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 2.4e-208 730.3 1212 38.6
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 1.2e-207 728.0 1216 38.0
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 1.2e-207 728.0 1224 37.0
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 1.7e-206 724.2 1215 38.1
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 2.2e-206 723.8 1215 37.9
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 4.9e-206 722.6 1216 38.0
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 6.5e-206 722.2 1205 37.8
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 6.5e-206 722.2 1215 37.4
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.9e-205 720.7 1215 37.9
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 7.1e-205 718.8 1217 37.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 9.3e-205 718.4 1210 37.9
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.9e-203 713.0 1216 37.7
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 6.7e-203 712.2 1218 37.8
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 6.7e-203 712.2 1221 37.4
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 8.7e-203 711.8 1219 37.4
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.1e-202 711.4 1224 37.5
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 1.5e-202 711.1 1227 36.8
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 3.3e-202 709.9 1212 37.9
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 5.7e-202 709.1 1209 37.6
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 5.7e-202 709.1 1224 36.1
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 4.8e-201 706.1 1216 37.7
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 2.4e-200 703.7 1215 37.7
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 2.4e-200 703.7 1213 37.1
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 6.9e-200 702.2 1215 37.9
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 5.9e-199 699.1 1174 38.0
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 1.0e-198 698.4 1210 37.2
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.3e-198 698.0 1215 37.4
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 1.7e-198 697.6 1214 37.1
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.7e-198 697.6 1216 36.6
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 1.7e-198 697.6 1220 36.9
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 2.9e-198 696.8 1215 36.9
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 1.1e-197 694.9 1215 36.5
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.4e-197 694.5 1222 36.5
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 5.5e-197 692.6 1163 37.9
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 1.8e-195 687.6 1222 37.0
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 2.2e-193 680.6 1101 38.1
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 6.5e-190 669.1 1218 36.9
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 4.2e-189 666.4 1221 37.3
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 3.0e-187 660.2 1217 35.7
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 2.0e-186 657.5 1234 35.5
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 5.7e-186 656.0 1207 36.5
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 1.7e-185 654.4 1188 36.6
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 2.0e-183 647.5 1105 37.4
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 7.5e-170 602.4 1202 33.1
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 4.2e-165 586.6 1214 34.4
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 2.2e-161 574.3 1204 33.7
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 5.9e-151 539.7 975 36.5
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 9.2e-144 515.8 833 36.1
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 4.1e-128 463.8 513 49.7
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 6.0e-127 459.9 1610 27.8
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 2.8e-124 451.1 713 38.0
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 8.4e-121 439.5 723 37.9
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 8.7e-118 429.5 715 37.6
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.1e-117 429.1 714 39.6
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 4.7e-116 423.7 616 39.9
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.4e-115 421.4 772 36.0
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 6.9e-115 419.9 522 45.6
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 2.2e-113 414.8 724 36.9
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 5.6e-101 373.6 715 35.7
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.6e-100 372.1 625 37.9
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 1.7e-97 362.1 625 37.1
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 2.2e-89 335.1 494 40.5
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 6.0e-87 327.0 471 41.4
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 6.5e-73 280.4 627 33.7
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 4.8e-68 264.2 537 33.9
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.2e-49 202.2 677 29.2
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 4.4e-45 188.0 252 40.5
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-30 139.4 495 25.1
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-29 136.7 623 25.2
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 6.0e-26 124.4 232 35.3
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-25 122.9 426 29.1
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 3.9e-25 121.7 138 45.7
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 9.5e-24 117.1 277 33.6
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-23 115.5 261 30.7
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 4.0e-22 111.7 150 41.3
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-22 111.3 147 42.9
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-22 111.3 147 42.9
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.7e-20 106.3 121 43.8
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 5.4e-19 101.3 170 37.6
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 7.0e-19 100.9 359 29.2
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.7e-18 99.0 236 28.8
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-14 86.3 164 35.4
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-13 83.6 161 35.4
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 2.0e-13 82.8 112 41.1
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-11 77.0 49 69.4
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-11 76.3 111 36.0
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 9.2e-11 73.9 242 28.1
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 5.1e-09 68.2 81 38.3
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 1.5e-08 66.6 49 59.2
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-08 65.9 233 24.5
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-08 65.9 233 24.5
SMO343G0003 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 5.6e-08 64.7 81 46.9


User provided reference genes

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